Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1266 ATGGAGAGTTTGAAGAAAACGTTGAAACCGTATGGTTCTCACAAATCAGCAAGGTCGAAGATATCAACAGGGGATGGAAGCCAAGACTCTGTGTTTGAAGAGCTCCCCATACTTCTAGCTCAACAATCTTGTTCTATCGCCATCAAAAGCGACCAGGATAGTAAAAATAATAAGAACAAGATGATGAAGGATAAGAATGATGATAATAATAATAATGATGGGAATATTAGTGGTTCTGAACATGATCCACCATCCCAGCTAATACGTAGATTCTTAGACAAACAGAAAATAATGACATCATCAGTATCAAGTGAAATGGGTGTTGACATGGACTTAAAAATGGATGGGCTCCCACTTCATGATTCATCTATTTCTATTTCTATTTCCAATTCTTCTACTTCAAATGATCCTCCTCCCACTAGTTACAAAACACCAACAGGAACACCTCAATATTCACAAAGCCGCCCTCCTCTTCCTCACCGTGATAGGGACACCTCCAACTCTGCCTTGCTCCGCACAACCAAAAGCAAAAGCAAAAACAGGTCTAAGTCCAGATTGCTTGACCCTGAATTCTCTCACCCTCAACATCAATACTCTAATCTTATCCCCAAATCCTCAGGCCAACTCTTCTATAGCTTTCTCGGCACCAAAAAAAGTGATGATGATGATGACGACGATAATGAAGACGACCCTTTCTCAGAAGAATATCTCCCGGATGAGTACAAGAATCGTACCCATTTCAGCCTATGGGTTCTCCTTGAGTGGTTGAGCCTCATTTGCATCATTGCTGCCCTTATTGCCAACCTTTGCATCCCTTCCTGGAAAGACAAGAACCTATGGGACCTTAGGTTATGGAAATGGGAGGTCATGATTCTTGTCCTAATATGCGGTCGTTTGGTCTCCGATTGGGTCATCCGCATTGTTGTCTTCTGCATTGAGAGGAATTTCGTGTTGCGTAAGAAAGTCTTATATTTTGTCTATGGTGTCAAGAAGGCTGTCCAGAATTGCTTGTGGTCTGGTCTTGTCTTGATTGCTTGGCATTCATTATTTGATAAGAAAAGGGGTAGTCAAACCAAAACTGACTTCCTCAATCATGTCACTAAGGTATTGCTGTGTTTCTTTCTGGCCACCGTTGTGTGGCTTCTCAAAACTCTATTGGTCAAGGTATTGGCTTCTTCATTTCATATGAGCACCTATTTTGATAGGATTCAAGAGTCATTGTTTAATCAATTCATAATAGAGACACTATCAGGACCACCTACCGTAAAGGATGATAAGCTAGTTTCTGAGGTACAAAAGCTGCAGAACGCAGGGGTAGCCATTCCACCAGGCCTGAGGGCCTCTGCATTCCCAAAAATCAAGAGTGGAGTGCTTAAAAGTGCAAAGTCTTCTCAATGTTGTTCCACTAACAAGGTGACAACAGATCAAGATAATGAGATAACTATTGATCACCTGCATAAGCTGAATCCAAAAAATGTGTCAGCTTGGAATATGAAAAGGCTAATCAATATGGTCCGAAATGGGGCTCTATCTACCCTAGATGAGCACATACCTGATGACTCCACACAAGGGGATGATGAGTCCATCAAGCATATTAAAAGTGAAAACGAGGCTAAAGCAGCAGCCAAGAAAATATTTCACAATGTTGCTAGGCCAAGTTCCAGGTACATATACCTGGAGGATTTAATGCATTTTATGCAAGAAGATGAAGCTATGAAAACCATGAATCTCTTTGAAGGAGCGTCTGAAACCTCTCAAATTAGCAAATCTGCTTTGAAGAACTGGGTGGTTAATGCCTTTAGAGAGAGGAGAGCGCTTGCTTTGACATTGAATGATACCAAAACGGCAGTGATCAATCTCCATCGAATACTCAATGTTGTGGTGGCCATTACTGTAGTGATTATTTGGTTGTTGATATTTCAAATTGCCACAAGCCAAGTTATTATGTTTGTAATGTCACAGACTTTGTTGTCTGCATTTGTATTTGGAAGTACTTGCAGGGCGGTGTTTGAATCAGTCATTTTCTTATTTATCATGCACCCATTTGATGTAGGAGACAGGTGTGAAATCGACAACACCCAGCTGGTTGTAGAAGAAATGAACATATTGACAACCATATTTCTAAGAGATGACAATGCAAAGGTCATGATCCCTAATAGTGTCCTAGCTACGAAACCCATCTATAATTTCTATCGGAGTCCTGACATGGGAGATGCTATTGATTTCTTTATACATGTCTCTACCCCGGCTGAAAGCATTGCACTTCTTAAACAAAGAATATTGAGTTATATTAATAACAAGAAGGACCATTGGCATCCTTCACCTATGATAGTGATAAAGGAGCATGAAAGTTTAAACATGATAAGAATAGCAATTTGGCTATGTCATACAATGAACTTCCAAGACATGGGAGAAAGATATGAGAGGAGATCCCTTTTGATAGAAGAGACGATTAAGATTTTCAAGGAGCTTGACATCCATTACCGTCTTCTGCCCCTTGATATTAACATTAGAAGCATGCCTGTCACTTCTGCTCGTCTTCCACCTAGTTGGGCCACAATCACAAGTTCAGTATAA 2577 0.4051 MESLKKTLKPYGSHKSARSKISTGDGSQDSVFEELPILLAQQSCSIAIKSDQDSKNNKNKMMKDKNDDNNNNDGNISGSEHDPPSQLIRRFLDKQKIMTSSVSSEMGVDMDLKMDGLPLHDSSISISISNSSTSNDPPPTSYKTPTGTPQYSQSRPPLPHRDRDTSNSALLRTTKSKSKNRSKSRLLDPEFSHPQHQYSNLIPKSSGQLFYSFLGTKKSDDDDDDDNEDDPFSEEYLPDEYKNRTHFSLWVLLEWLSLICIIAALIANLCIPSWKDKNLWDLRLWKWEVMILVLICGRLVSDWVIRIVVFCIERNFVLRKKVLYFVYGVKKAVQNCLWSGLVLIAWHSLFDKKRGSQTKTDFLNHVTKVLLCFFLATVVWLLKTLLVKVLASSFHMSTYFDRIQESLFNQFIIETLSGPPTVKDDKLVSEVQKLQNAGVAIPPGLRASAFPKIKSGVLKSAKSSQCCSTNKVTTDQDNEITIDHLHKLNPKNVSAWNMKRLINMVRNGALSTLDEHIPDDSTQGDDESIKHIKSENEAKAAAKKIFHNVARPSSRYIYLEDLMHFMQEDEAMKTMNLFEGASETSQISKSALKNWVVNAFRERRALALTLNDTKTAVINLHRILNVVVAITVVIIWLLIFQIATSQVIMFVMSQTLLSAFVFGSTCRAVFESVIFLFIMHPFDVGDRCEIDNTQLVVEEMNILTTIFLRDDNAKVMIPNSVLATKPIYNFYRSPDMGDAIDFFIHVSTPAESIALLKQRILSYINNKKDHWHPSPMIVIKEHESLNMIRIAIWLCHTMNFQDMGERYERRSLLIEETIKIFKELDIHYRLLPLDINIRSMPVTSARLPPSWATITSSV* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1266 858 MobiDBLite consensus disorder prediction 123 201 - -
Lan15g1266 858 Gene3D - 681 730 IPR023408 -
Lan15g1266 858 PIRSF Memb_At2g17000 27 857 IPR016688 -
Lan15g1266 858 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 40 138 IPR016688 -
Lan15g1266 858 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 174 854 IPR016688 -
Lan15g1266 858 MobiDBLite consensus disorder prediction 53 70 - -
Lan15g1266 858 MobiDBLite consensus disorder prediction 1 28 - -
Lan15g1266 858 MobiDBLite consensus disorder prediction 123 155 - -
Lan15g1266 858 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 40 138 - -
Lan15g1266 858 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 174 854 - -
Lan15g1266 858 SUPERFAMILY Sm-like ribonucleoproteins 671 730 IPR010920 -
Lan15g1266 858 MobiDBLite consensus disorder prediction 47 85 - -
Lan15g1266 858 Pfam Mechanosensitive ion channel 623 827 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1266 Lan-Chr15 20869877 20873355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1266 81 857 Mechanosensitive Ion Channel Family AT1G78610 53.770 0.0 808
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1266 K22048 - gmx:102665658 937.176