Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1261 ATGAAGAAATTGATTGGATTGAAAAGCAATGTTATTGTAGATAACTCAGGGGATAGCCGTTTAAAGAAGAGTATTCTTCTTAAAACCCTACAATCTCATGTCTCCACAGTCAAGATCACTGAGTCTACGCTTGAAGCACTTGAAGGAATCGAAGAACTCCACCGTTGCGATGCTTCCACTCTCACACCTTCAATCACAGCTGCTTATTGTGCTGTCGCGTTGGAGTGCACCTTAAAATACCTTCAATCTGACCTATCTGTGGAGAATAATCCCTTATATGTCAGTGCCGTTCAGAGGATATGGCGGGATCGGTTCGGGTACTTGGAGGGTGGTGGGTCCCTTTTGTTTTCATCTGAGTTAAAGCAATGGAAAATTCAATTGGAGGCTTCCCTTGTTGATAACAAAATGGTTATAGAGTTGGCTGAGTTGAATACTAGAAGGAATGCAATTACTAAGGTTAAAGATTATTTGGCCAATGCCTGGTCTGATTTGGGTCCTTCTTTTATTCAATTGCTAACTCAACAATCCAATAAAGAACAACCTCACAAAGGAACTGATACAGGAGGACCATCTATTCCTATTCCTACGAATCCGGGTGCTACTCCGCCTCCAAACCAACACAAATTACTGGCCTCTGCATCAATTCAGGTACAAAATGAGACTACTGCTGATATTGTTGTTGAGGAAATGGATCCACCTAAAAGTTGTACAAAACTTGGCACCGATGGCAAGGAAACGGATCCGCCGAAAACTTGTGGTGAAGTTGACTCTTTGCCAACGAGACCTCAAATACAAGAAGAAACCTTGGTTAAGGATCCTCCTGAAAGTAGATTTCATTTGCCTAGCCCAAAGAGGAAGATAGTGTCTCCATTGAAGAAGTACCAACCAGTAAACATTACAAAAAGGAGAAAACCTAAAAAATGGAGTGCATTGGAAGAGGATAAGCTTAAGAGTGCTGTTAACGAAATTGGCGAAGGAAACTGGAAGGCCATCTTATATTCCAACTTAGAAATATTTTCAGAGAGAACTCCGACCGATTTGAAAGATAAGTGGAGAAACATGGCACGCTGTGGAGGCATATGA 1083 0.4155 MKKLIGLKSNVIVDNSGDSRLKKSILLKTLQSHVSTVKITESTLEALEGIEELHRCDASTLTPSITAAYCAVALECTLKYLQSDLSVENNPLYVSAVQRIWRDRFGYLEGGGSLLFSSELKQWKIQLEASLVDNKMVIELAELNTRRNAITKVKDYLANAWSDLGPSFIQLLTQQSNKEQPHKGTDTGGPSIPIPTNPGATPPPNQHKLLASASIQVQNETTADIVVEEMDPPKSCTKLGTDGKETDPPKTCGEVDSLPTRPQIQEETLVKDPPESRFHLPSPKRKIVSPLKKYQPVNITKRRKPKKWSALEEDKLKSAVNEIGEGNWKAILYSNLEIFSERTPTDLKDKWRNMARCGGI* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1261 360 ProSiteProfiles Myb-like domain profile. 300 355 IPR001005 -
Lan15g1261 360 SMART sant 304 357 IPR001005 -
Lan15g1261 360 MobiDBLite consensus disorder prediction 176 207 - -
Lan15g1261 360 PANTHER MYB TRANSCRIPTION FACTOR 15 233 - -
Lan15g1261 360 PANTHER MYB TRANSCRIPTION FACTOR 272 356 - -
Lan15g1261 360 CDD SANT_TRF 306 356 - -
Lan15g1261 360 MobiDBLite consensus disorder prediction 232 258 - -
Lan15g1261 360 Gene3D - 297 358 - -
Lan15g1261 360 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 300 359 IPR017930 -
Lan15g1261 360 MobiDBLite consensus disorder prediction 176 194 - -
Lan15g1261 360 SUPERFAMILY Homeodomain-like 302 355 IPR009057 -
Lan15g1261 360 Pfam Myb-like DNA-binding domain 306 354 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1261 Lan-Chr15 20851316 20854180 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1261 13 354 Single Myb Histone (SMH) Gene Family AT1G15720 25.867 1.09e-23 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan15g1261 Myb_DNA-binding 1.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1261 - K11111 lang:109327791 712.99