Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1253 ATGTTAAATCCAACAAGTGTAGTGTCGTTTTGGTTCTTGTTGTTTCTGTCACTGTTTCACCTCACACTGGAGCAAATTGAGCCACTGAGTTCACCCACTGACCGTGAAGCACTTCTCCAGCTAAGGGGTTCTCTTGGTCTCAGGGGCAAAGAATGGCCAATAAAACCAGACCCTTGTTTAATCTGGGTTGGTATCACATGCCGCAATGGTAACGTTGTTGGGATCAATATCTCAGGGTTCAGAAGAACTAGACTTGGTAGGAGAAACCCTCAATTTGCAGTTGATGCTCTGTCCAATTTCACTTCCTTGCAGTCATTCAATGCTTCAAATTTTATGCTCCCAGGTCCTATTCCTGATTGGTTTGGACTTCGGCTACCATTGCTTCGTGTGCTCGATCTCCGTTCTTGCTCTATTATTGATGCTATTCCTTCTAGCCTAGGGAATTTGACCAACCTAACAACTTTGTTTCTTTCTCATAACAAGCTTACTGGGACAGTTCCAGATAGTATTGGTCAACTCTCAGCCCTTTCGGTCCTTGATCTTTCGCGGAATTCGCTTACTGGCTCCATACCAACATCTTTGGCCTTTCTTCCTAATCTGTCATCCCTTGACATGTCTTCCAATTTTTTGTCTGGGCCGATTCCGCCCGGCATTGGGGGACTTTCCAAGTTACAATACTTAAACCTTTCGAGCAACGGCCTAACTTCTTTACCGTCGCAAATAGGGGGTCTTGGTAACTTGGTTGACCTTGATCTTAGTGACAATTCTTTCACTGGTGGAGTAGTGCCTTCAGATTTGAAAGGGTTGAGAAACTTGCAGAGAATGATGCTTGCGAATAGCATGCTTGGTGGACCACTGCCTAGGAACTTGTTTGGTATTTCATTGCACTTGCAGTCCGTAGTGCTGAGACAAAACAATTTTACTGGTTCTTTGCCTGTTGAGTTGTGGTCGCTGCCAAGGTTGACTTTCCTTGACGTATCTGCCAATAAATTCGGTGGTTTGATTCCCAAGTCTAGCTCTGCAGCTAATGGTACTACTGCGGTGCTTAATATTTCTCATAATGTGTTTTATGGAAACCTCACTCATGTACTCGGAAGGTTCAGGTTTGTGGATCTGTCAAACAATTATTTTGAGGGACGTGTTCTAAATTTCACATATAATGCATCTCTAGCTAGCAACTGTCTTCAAAATGTGACAAATCAGAGGACTACAGTGGATTGTGCATCATTTTATGCTGTGAGGGGCCTCACTTTTGATAATTTTGGACACCCAAATTCGACAAAGCCCAGTGCAGCTGAAGGGCCTGGGAAGAGCAATAAAACTAAGATTATATTGGCAGCAGTTTTAGGTGGACTGGGTTTAATTGCATTTTTGGTGTTATTGGTGGTTCTTCTGCTTCTATGTGCTCGTAAGCGGGGTGATCCAAATCATAGGGGAAATGGTGTGGGCCCTGCTCCTGCTGGAGGCAGTCCTTCGCATCCTACAGGTGAATCAGTTGACTTTTCAAATGTAGGAGACTCATTTACATATCTTCAGTTGCTCCAAGCTGCAGGAGATTTCAATGATGGAAATCTTATCAAACATGGCCACTCTGGGGATTTATTCAATGGTGTTTTGGAAAGTGGAATTCCTGTTGTCATCAAAAGGACCGACACACGTTCAACTAAAAAGGATACTTACCTATTGGAATTGGAATTTTTCAACAAGGTTTCTCATCAAAGATTTGTTCCCCTATTGGGCCATTGTTTAGAAAATGAGAATGAGAAGTTCCTTGTTTATAAACATATGCCAAATGGGGACTTGTCCAATTCCTTATACTTCAAAAATAATACACCTGGAGATGGTACTTTGCAGTCATTAGACTGGATAACTAGGTTGAAAATTGCTATTGGAGCAGCAGAAGCCCTATCATATCTGCATCACGAATGTATTCCGCCCTATGTTCACAGGGATGTTCAAGCAAGTAGTATACTTCTAGATGATAAATATGAAGTTCGGTTAGGCAGTCTAAGTGAAGTCTGCGCTCAAGAAGGTGATTCTCATCAAAGTAGAAGACTCGGGTTTATGCGGTTACCACAGTCCTATGATCCAAGCTCATCTGGTCCATCAACATCAGTTTGTGCCTATGATGTCTATTGCTTTGGGAAAGTGTTACTTGAGCTAGTGACCGGTAAGCTGGGAATTAGTGCGTCCAGTGATGGTGAAGTAAAGGAATGGCTGGACCAAGTTCTACCTAACATTACTATGTATGACAAGGATCTCGTGACAAAAATTGTCGATCCATCTCTGTTTCTTGATGAGGATTTCTTGGAAGAAGTGTGGGCCATAGCCATTGTTGCCAGGTCCTGTCTTAATCCCAAACCTGCAAAAAGACCCCCAATGCGATATGTTCTCAAGGCTTTGGAAAGCCCTTTCAAAGTTGTCAGGGAAGAAAGCTCGAGTTCCGCACGGCTTAGAGCAACCTCTTCCAGAGGCTCTTGGAATGCTGCTTTGTTTAGTAGTTGGCGTCAGAGTTCATCAGATGCCACAACAGTAATTCCACAAACCTCTGGTGCATCAAAAGGAGAAGGAACAAGTAGTTTAAAGCTTTCAGGACCTGGCTCACAGTCACAGGGTAGTTTCCACAATGGTGCTGGCGACATTTCATTGTCTCGTAGACGTTATTCGAAGGAGTTATTCTCGGTGCGGTCTGGCTTACATGATGTAGAGAGGGTGGATCAGGAATAG 2727 0.4342 MLNPTSVVSFWFLLFLSLFHLTLEQIEPLSSPTDREALLQLRGSLGLRGKEWPIKPDPCLIWVGITCRNGNVVGINISGFRRTRLGRRNPQFAVDALSNFTSLQSFNASNFMLPGPIPDWFGLRLPLLRVLDLRSCSIIDAIPSSLGNLTNLTTLFLSHNKLTGTVPDSIGQLSALSVLDLSRNSLTGSIPTSLAFLPNLSSLDMSSNFLSGPIPPGIGGLSKLQYLNLSSNGLTSLPSQIGGLGNLVDLDLSDNSFTGGVVPSDLKGLRNLQRMMLANSMLGGPLPRNLFGISLHLQSVVLRQNNFTGSLPVELWSLPRLTFLDVSANKFGGLIPKSSSAANGTTAVLNISHNVFYGNLTHVLGRFRFVDLSNNYFEGRVLNFTYNASLASNCLQNVTNQRTTVDCASFYAVRGLTFDNFGHPNSTKPSAAEGPGKSNKTKIILAAVLGGLGLIAFLVLLVVLLLLCARKRGDPNHRGNGVGPAPAGGSPSHPTGESVDFSNVGDSFTYLQLLQAAGDFNDGNLIKHGHSGDLFNGVLESGIPVVIKRTDTRSTKKDTYLLELEFFNKVSHQRFVPLLGHCLENENEKFLVYKHMPNGDLSNSLYFKNNTPGDGTLQSLDWITRLKIAIGAAEALSYLHHECIPPYVHRDVQASSILLDDKYEVRLGSLSEVCAQEGDSHQSRRLGFMRLPQSYDPSSSGPSTSVCAYDVYCFGKVLLELVTGKLGISASSDGEVKEWLDQVLPNITMYDKDLVTKIVDPSLFLDEDFLEEVWAIAIVARSCLNPKPAKRPPMRYVLKALESPFKVVREESSSSARLRATSSRGSWNAALFSSWRQSSSDATTVIPQTSGASKGEGTSSLKLSGPGSQSQGSFHNGAGDISLSRRRYSKELFSVRSGLHDVERVDQE* 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1253 908 Gene3D Transferase(Phosphotransferase) domain 1 596 821 - -
Lan15g1253 908 Pfam Leucine Rich Repeat 128 149 IPR001611 GO:0005515
Lan15g1253 908 Pfam Leucine Rich Repeat 223 239 IPR001611 GO:0005515
Lan15g1253 908 Gene3D Ribonuclease Inhibitor 191 290 IPR032675 -
Lan15g1253 908 Gene3D Ribonuclease Inhibitor 33 190 IPR032675 -
Lan15g1253 908 PANTHER RECEPTOR-LIKE PROTEIN 55 11 188 - -
Lan15g1253 908 PANTHER RECEPTOR-LIKE PROTEIN 55 186 847 - -
Lan15g1253 908 SUPERFAMILY Protein kinase-like (PK-like) 496 801 IPR011009 -
Lan15g1253 908 ProSiteProfiles Leucine-rich repeat profile. 223 244 IPR001611 GO:0005515
Lan15g1253 908 MobiDBLite consensus disorder prediction 842 878 - -
Lan15g1253 908 MobiDBLite consensus disorder prediction 476 498 - -
Lan15g1253 908 ProSiteProfiles Protein kinase domain profile. 520 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g1253 908 SUPERFAMILY L domain-like 89 419 - -
Lan15g1253 908 Gene3D Ribonuclease Inhibitor 291 405 IPR032675 -
Lan15g1253 908 PANTHER BNAA07G03560D PROTEIN 11 188 - -
Lan15g1253 908 PANTHER BNAA07G03560D PROTEIN 186 847 - -
Lan15g1253 908 Pfam Leucine rich repeat 150 208 IPR001611 GO:0005515
Lan15g1253 908 MobiDBLite consensus disorder prediction 842 880 - -
Lan15g1253 908 PRINTS Leucine-rich repeat signature 176 189 - -
Lan15g1253 908 PRINTS Leucine-rich repeat signature 197 210 - -
Lan15g1253 908 Pfam Protein tyrosine and serine/threonine kinase 525 744 IPR001245 GO:0004672|GO:0006468
Lan15g1253 908 Gene3D Phosphorylase Kinase; domain 1 492 595 - -
Lan15g1253 908 SMART LRR_typ_2 173 196 IPR003591 -
Lan15g1253 908 SMART LRR_typ_2 125 148 IPR003591 -
Lan15g1253 908 SMART LRR_typ_2 318 341 IPR003591 -
Lan15g1253 908 SMART LRR_typ_2 221 244 IPR003591 -
Lan15g1253 908 SMART LRR_typ_2 197 220 IPR003591 -
Lan15g1253 908 SMART LRR_typ_2 149 172 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1253 Lan-Chr15 20815806 20820669 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1253 33 693 Miscellaneous Gene Families AT2G16250 56.222 0.0 719
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Lan15g1253 PK_Tyr_Ser-Thr 7.5e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1253 - - lang:109344030 1419.06