Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1252 ATGCCTGCGTCAGCCAACTTCTCCGGTGGTGCTCTGCTACCGGAGCTCACTCACCGAACACACATTCTAGGTCTCAAACTCTACGTCATCGTACTCTTTTTCCTCCTAATCCTGCTAACTACGCTTCTTATATTCTTCATCTGCATCACAAAACGCAGAACGCCACTTAAACACAGCTCCGGCACAATCCCTCTCGTCTCCAAAGATATCATCCAGGTCAAAACGCATCGTATCACTGTTCATGACATTAATAATCCAAAGAGCGAAGAAGAGAAAGAGAAGGTGGTCTCAGCAAACATAGGGTGGGGAAGGTGGTATAGTCTGAAGGAGCTTGAAGAAGCGACACGTGGATTTCAAGAAGGGAATGTGATCGGAGAAGGAGGGTATGGGATTGTGTATAAAGGAATTTTGCACGACGGTTCTGTCGTCGCTGTCAAGAATCTTCTCAACAACAACAAGGGGCAAGCAGAGAAAGAGTTTAAGGGGGAGGTTGAAGCCATTGGAAAAGTGAGGCATAAGCATTTGGTGGGACTAGTTGGATATTGTGCAGAAGGTGCTCAAAGGATGCTTGTTTATGAATACATTGACAATGGAACTTTGGAGCAGTGGCTTCATGGTGATGTAGGGTCTGTTAGCCCCTTGACTTGGGATATAAGAATGAAGGTTGCTGTTGGGATTGCAAAAGGGCTAGCTTACTTGCATGAAGGCTTAGAACCCAAAGTTGTCCACCGAGATGTAAAATCCAGTAACATTCTTTTGGACAAAAAGTGGAATGCTAAAGTATCTGACTTTGGACTGGCCAAACTCTTAGGGTCTGAGAAAAGTTATGTGACAACGCGTGTAATGGGGACATTTGGATATGTTTCACCCGAGTATGCAAGCACGGGTATGCTTAATGAGGGCAGTGATGTATATAGTTTTGGCATTCTACTTATGGAGCTAATCACAGGAAGAAGCCCCATCGATTACTCTAGACCACCTGCAGAGATGAACTTGGTTGATTGGTTTAAGGGAATGGTAGCAAGTCGTTGTGGTGATGAGCTAGTTGATCCTTTAATTGAGATTAAACCCTCTCCAAGATCTTTGAAGCGAGCTTTACTGGTTTGTCTACGCTGTATAGATTTGGATGTCATTAAACGACCAAAGATGGGTCAGATTGTTCATATGCTTGAGGCAGATGATTTCCCCTTTCGTTCTGAACATCGTACTAGAGAGACAGATCATGATTCATCTCGCACAACTGTTTCCATTAAAGTTCCATATCCAACCGGGCATGTAGAACTATCAAGCTGGAGATGA 1299 0.4411 MPASANFSGGALLPELTHRTHILGLKLYVIVLFFLLILLTTLLIFFICITKRRTPLKHSSGTIPLVSKDIIQVKTHRITVHDINNPKSEEEKEKVVSANIGWGRWYSLKELEEATRGFQEGNVIGEGGYGIVYKGILHDGSVVAVKNLLNNNKGQAEKEFKGEVEAIGKVRHKHLVGLVGYCAEGAQRMLVYEYIDNGTLEQWLHGDVGSVSPLTWDIRMKVAVGIAKGLAYLHEGLEPKVVHRDVKSSNILLDKKWNAKVSDFGLAKLLGSEKSYVTTRVMGTFGYVSPEYASTGMLNEGSDVYSFGILLMELITGRSPIDYSRPPAEMNLVDWFKGMVASRCGDELVDPLIEIKPSPRSLKRALLVCLRCIDLDVIKRPKMGQIVHMLEADDFPFRSEHRTRETDHDSSRTTVSIKVPYPTGHVELSSWR* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1252 432 ProSitePatterns Protein kinases ATP-binding region signature. 124 146 IPR017441 GO:0005524
Lan15g1252 432 PANTHER OS01G0323000 PROTEIN 91 406 - -
Lan15g1252 432 SMART serkin_6 118 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g1252 432 CDD STKc_IRAK 124 391 - -
Lan15g1252 432 ProSiteProfiles Protein kinase domain profile. 118 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g1252 432 Pfam Protein kinase domain 118 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g1252 432 Gene3D Transferase(Phosphotransferase) domain 1 195 406 - -
Lan15g1252 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
Lan15g1252 432 SUPERFAMILY Protein kinase-like (PK-like) 102 401 IPR011009 -
Lan15g1252 432 Gene3D Phosphorylase Kinase; domain 1 77 194 - -
Lan15g1252 432 PANTHER OS03G0227900 PROTEIN 91 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1252 Lan-Chr15 20811596 20815363 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1252 105 391 Trihelix Transcription Factor Family AT5G38560 48.464 1.50e-89 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lan15g1252 Pkinase 1.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1252 - - gmx:100779420 635.18