Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1242 ATGTTGAACCCAGATATTGAGATCAACATTATGTCGCAACAAAATTTCAACTTTGGTATTCAGAAACCTGAACAAGAGCAAAATGTGCGGACGGAATATGCTGCTATTCAGATGGCAACACCCACCGTTGCTCCTCTTCCACTTTCTACCGTTAACTTTAACGGTGCTGCCGTGCACGGCCCTGTGGGTAGCTCTGAACCTGTGAAAAGGAAGAGAGGAAGGCCAAAGAAAATTGAATCCAACGGTCCAATTGCGGTTACGGCTGCTCCGGCAGGTGTACATTTTGGTCCTCCTAGTGCTTCCACAGCTCCTTTTGCTCCCTTTGCTCATGCTGCTGCTACTGCTGCTTATGCCGCCGCCACCACTCCTTTTTCCCCGGCTGCACCTGCTTCTGCTCCTGCTCCTGGTGCTCCTGCATCCACAGTTCCGGTGAAAAAGAGAGGCAGACCTCGCGGTTCTGTCAATAAGCATCGTCGCGTCAATGAACCAGGTCCAGAATTTCCATTGACCCCTCATGTTATCACCGTGAAAGCTGGAGAGTGTCTTGCGACGAAGATTGTGGCCCTTTCGCTGGATGTACGCAGCAATGTTTGCATATTGTCTGCAAATGGAGCCATTTCTCGGGTGACACTCCGTCAGCCCTCATCTGGATCCGTGACTTATGAGGGTCGCTTTGAGATCCTTACACTCGGTGGCTCTTTACTTCTCTATGATAATAGCGGTCCATCCCACAGATCTAGTGGACTAAGTGTCTCCTTGTCTGGGCCAGATGGTCATGTTGTGGGAGGTGGCGTTATGGGTGAACTGATTGCTGCTTCCGCTGTTCAGGTTGTTTTGTTGAGCTTTCCTGGTGAATATTGCAATGTCCCCAAGCTGGCAAACCAAATGGGGAATTCATCTGCCTCACCAAAGTTTGCCAATGCTGGCCAAAGCAGCTCACCATCACAGGGCACGCTCAGCGAATCGTCGGATGGACCTGGGAGCCCTCACAACCCAAGTTCCTGA 1005 0.5085 MLNPDIEINIMSQQNFNFGIQKPEQEQNVRTEYAAIQMATPTVAPLPLSTVNFNGAAVHGPVGSSEPVKRKRGRPKKIESNGPIAVTAAPAGVHFGPPSASTAPFAPFAHAAATAAYAAATTPFSPAAPASAPAPGAPASTVPVKKRGRPRGSVNKHRRVNEPGPEFPLTPHVITVKAGECLATKIVALSLDVRSNVCILSANGAISRVTLRQPSSGSVTYEGRFEILTLGGSLLLYDNSGPSHRSSGLSVSLSGPDGHVVGGGVMGELIAASAVQVVLLSFPGEYCNVPKLANQMGNSSASPKFANAGQSSSPSQGTLSESSDGPGSPHNPSS* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1242 334 SUPERFAMILY AF0104/ALDC/Ptd012-like 169 285 - -
Lan15g1242 334 MobiDBLite consensus disorder prediction 297 334 - -
Lan15g1242 334 CDD DUF296 170 238 IPR005175 -
Lan15g1242 334 ProSiteProfiles PPC domain profile profile. 166 304 IPR005175 -
Lan15g1242 334 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 27 325 IPR039605 GO:0003680
Lan15g1242 334 Pfam Plants and Prokaryotes Conserved (PCC) domain 171 283 IPR005175 -
Lan15g1242 334 Gene3D - 171 294 - -
Lan15g1242 334 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 10 27 325 - -
Lan15g1242 334 MobiDBLite consensus disorder prediction 126 166 - -
Lan15g1242 334 Pfam AT hook motif 69 78 IPR017956 GO:0003677
Lan15g1242 334 Pfam AT hook motif 145 155 IPR017956 GO:0003677
Lan15g1242 334 SMART AT_hook_2 144 156 IPR017956 GO:0003677
Lan15g1242 334 SMART AT_hook_2 69 81 IPR017956 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1242 Lan-Chr15 20749033 20753080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1242 51 327 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 42.857 5.12e-47 160