Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1231 ATGTCTGCGATGTCTGCTATGCGACGCGAAGGGAAGCGTTTCGCTCCTCTCATTCTCCGATCCTCTCTTTCTCTAGATCAAAACCTCATTGGAGCACGTTCTATTTCAACTCAAATAGTCAGAAATCGGATGAAGAGTGTGAAGAATATCCAGAAAATCACCAAGGCAATGAAGATGGTTGCAGCCTCAAAGCTGCGAGCTATTCAGACTAGAACTGAAAATTCACGTGGCCTATGGCAGCCATTTACTGCCCTCCTGGGTGACACTCCTAGTGTTGATGTCAAGAAAAACGTTGTTGTTACCATTTCTTCAGACAAAGGTCTCTGTGGTGGAATCAATTCGACATCTGTCAAGATAAGCAGGGTTTTGAGTAAATTGAATTCTGGGCCTGATAAAGAGACAAAGTATGTCATATTGGGAGAGAAGGCTAAGGCTCAATTGACACGTGACTCGAAGAAAGACATTGAGATCATCATAACAGAGTTGCAGAAAAATCCTTTGAACTATACTCAGGTATCTGTCCTAGCTGATGACATTCTAAAGAATGTTGAGTATGATGCTTTGAGGATTGTTTTCAACAAGTTTCAATCAGTTGTCTCATTTCTGCCAACAGTGTCGACTGTATTATCTCCTGAGGTTGTGGAGAGAGAGGCCGAGGCTGGGGGAAGGCTTGGAGAGCTGGACTCTTATGAGATTGAAGGCGGTGATACAAAATCAGAAATTCTTCAGAATCTGGCTGAGTTCCAGTTTTCTTGTGTGATGTTCAACGCGGTGTTGGAGAATGCTTGCAGTGAGCAAGGAGCGAGGATGTCTGCCATGGACAGCTCTAGCAGGAATGCTGGGGACATGCTTGATCGTCTCACCCTTACCTATAACAGAACCCGTCAAGCATCAATTACCACCGAATTGATTGAGATTATCTCTGGAGCTTCAGCGCTGACCGGTTAA 948 0.4441 MSAMSAMRREGKRFAPLILRSSLSLDQNLIGARSISTQIVRNRMKSVKNIQKITKAMKMVAASKLRAIQTRTENSRGLWQPFTALLGDTPSVDVKKNVVVTISSDKGLCGGINSTSVKISRVLSKLNSGPDKETKYVILGEKAKAQLTRDSKKDIEIIITELQKNPLNYTQVSVLADDILKNVEYDALRIVFNKFQSVVSFLPTVSTVLSPEVVEREAEAGGRLGELDSYEIEGGDTKSEILQNLAEFQFSCVMFNAVLENACSEQGARMSAMDSSSRNAGDMLDRLTLTYNRTRQASITTELIEIISGASALTG* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1231 315 CDD F1-ATPase_gamma 36 310 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lan15g1231 315 Pfam ATP synthase 38 313 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lan15g1231 315 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 38 313 IPR035968 GO:0015986|GO:0045261|GO:0046933
Lan15g1231 315 Gene3D - 60 272 - -
Lan15g1231 315 PANTHER ATP SYNTHASE GAMMA CHAIN 3 313 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lan15g1231 315 TIGRFAM ATPsyn_F1gamma: ATP synthase F1, gamma subunit 36 313 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lan15g1231 315 PIRSF ATP_synthase_gamma 8 313 - -
Lan15g1231 315 PANTHER BNAA05G10580D PROTEIN 3 313 - -
Lan15g1231 315 Gene3D ATP synthase, gamma subunit, helix hairpin domain 40 310 - -
Lan15g1231 315 PRINTS ATP synthase gamma subunit signature 94 113 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lan15g1231 315 PRINTS ATP synthase gamma subunit signature 186 203 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lan15g1231 315 PRINTS ATP synthase gamma subunit signature 260 279 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lan15g1231 315 PRINTS ATP synthase gamma subunit signature 291 312 IPR000131 GO:0015986|GO:0045261|GO:0046933
Lan15g1231 315 ProSitePatterns ATP synthase gamma subunit signature. 299 312 IPR023632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1231 Lan-Chr15 20655781 20660340 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1231 24 313 Primary Pumps ATPases AT1G15700 30.659 4.37e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1231 K02136 - csin:114262903 522.702