Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1229 ATGGGTTCTTGCTTTTCCAAACACTCTATTCCTCCTCCATACGACACCGTTCCTTCTCCCTCCAACGCTTCCCTTCACAACCTTCCACCCTTCTCTCAATTTTCTCTCTCCGACCTCAAATCCGCCACCACCACCTTCAGCTCCGACCACATCGTGTCCGAGAGCGGCGAAAAGGCGGCGAATGTGGTTTACAAAGGGAACCGTAACGGTCGTTGGATTGCAGTTAAGAGATTCTCTAAATCAGCATGGCCTGACCCTAAGCAGTTCGCTGATGAAGCTTGGGGAGTTGGGAAATTGAGGCACCATAGTGTTGCTAATTTGATTGGTTATTGCTGTGATGGTGATGAGAGGCTCCTAGTTGCAGATTACATGGCTAACGATACTCTTGCCAAACATCTTTTTCACTGGGAAAATCAGACAATTGAGTGGAGCATGCGGTTAAGAGTTGCTCAATCCATTGCTGAAGCTTTAGACTATTGTAGTGGTAAAGGTCATCCGTTATACCACGACTTGAATGCTTACAGAGTTCTATTTGATGAGAATGGCAACCCCAGGCTTTCGTGTTTTGGGTTGATTAAGAACAGCAGGGACGGGAAAAGTTATAGCACAAATCTTGCTTATACACCTCCTGAGTATCTGAGAATTGGGAGGGTTACTCCAGAAAGCGTTATCTTTAGTTTTGGGACTGTATTATTGGATCTTCTAAGTGGCAAGCATATCCCTCCAAGTCATGCTCTTGACATGATAAAGGGTAGAAATATTCAACTCCTCATGGATTCACATTTGGAGGGGAACTTTTCAACAGAAGAGGCAACTGTGGTTTTTGATCTTGCATCGCATTGTTTGCAGTATGAACCTCGGGAGCGGCCGACGACCAAGGACCTTGTTACAACACTTTCCGCTCTACAATTGAAACCTGATGTTCCATCATATGTTCTGCTCGGAATTCCAAAGCATGAGGAAGCACCTCCTACCCCACAGCATCCCCTGTCTCCATTTGGCGATGCTTGTTCTCGCATGGACCTTACAGCTGTTCATCAGATTTTCTTGATGACACATTATAGGGATGATGAAGGGACTAATGAGTTGTCTTTCCAAGAGTGGACCCAGCAAATGAGGGATGTGTTGGAGGCAAGAAAGCATGGTGACTTGGCATTTCGTGACAAGGATTTCAAAACATCACTTGAGTGTTACTCCCAGTTCATTGATGGTGGAACCATGGTTTCCCCAACCGTCTATGCTCGGAGAAGTCTATGCTATCTCTTTTGTGATCAACCCGATGCTGCTCTACGAGATGCAATGCAAGCTCAATGTGTTTATCCTGACTGGCCTACAGCATTTTACATGCAGTCTGTAGCTCTTTCCAAATTAAACATGACTAAGGATGCCAGTGACATGTTGAGTGAGGCTTCTGCTTTAGAAGAAAAAAGGCAACAAGGGAAAGGGCACTGA 1452 0.4539 MGSCFSKHSIPPPYDTVPSPSNASLHNLPPFSQFSLSDLKSATTTFSSDHIVSESGEKAANVVYKGNRNGRWIAVKRFSKSAWPDPKQFADEAWGVGKLRHHSVANLIGYCCDGDERLLVADYMANDTLAKHLFHWENQTIEWSMRLRVAQSIAEALDYCSGKGHPLYHDLNAYRVLFDENGNPRLSCFGLIKNSRDGKSYSTNLAYTPPEYLRIGRVTPESVIFSFGTVLLDLLSGKHIPPSHALDMIKGRNIQLLMDSHLEGNFSTEEATVVFDLASHCLQYEPRERPTTKDLVTTLSALQLKPDVPSYVLLGIPKHEEAPPTPQHPLSPFGDACSRMDLTAVHQIFLMTHYRDDEGTNELSFQEWTQQMRDVLEARKHGDLAFRDKDFKTSLECYSQFIDGGTMVSPTVYARRSLCYLFCDQPDAALRDAMQAQCVYPDWPTAFYMQSVALSKLNMTKDASDMLSEASALEEKRQQGKGH* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1229 483 Gene3D Transferase(Phosphotransferase) domain 1 125 313 - -
Lan15g1229 483 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK11 23 481 - -
Lan15g1229 483 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 23 481 IPR045845 GO:0004672|GO:0009742
Lan15g1229 483 SUPERFAMILY TPR-like 376 479 IPR011990 GO:0005515
Lan15g1229 483 Pfam Protein kinase domain 62 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g1229 483 SUPERFAMILY Protein kinase-like (PK-like) 24 309 IPR011009 -
Lan15g1229 483 ProSiteProfiles Protein kinase domain profile. 49 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g1229 483 Gene3D Tetratricopeptide repeat domain 373 482 IPR011990 GO:0005515
Lan15g1229 483 Gene3D Phosphorylase Kinase; domain 1 22 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1229 Lan-Chr15 20645735 20649868 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1229 34 326 Glycoside Hydrolase AT3G07070 33.230 5.78e-43 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lan15g1229 Pkinase 1.6e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1229 K14500 - csin:114315244 811.986