Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1210 ATGCGTGGGTTGCAAAAATCGAAACGAGTAACTTGGGCTTCATCTTTAAATCTTTGTCAGGTTAAGTTATTCTTATCAGAGGACTCTCCTTCACTAGTTGGGTTAAGTTCTCAGGACCACCTCCAAGCAAAGAGATCATTGCCCTCGCATCCAGATGGGGCTGGTTCTGATGACATCCTACCTCCTGGCTTTGAGGGAACTCATGCTTCAAGTCAGTTCGAGATCGATCTGTCCCAAATACCAGTGGTTCAATGGATTAATCCACCCAAGTTTGTGCTGGATCTCGCATGGCAAGTGGTGGCTGGGGAAGAAAGCAAAGAGGTGGAGGAACAACATAAGAGGGAAATGAGAGTACTTGAAGCTATTTATCCTCGCCCATCCTCCATTCCTCCAAACCCTGCTATTGCAATTGATGTTGAAGATTCCCATTCCATTGATGATGGTCAAACTGCTTTGATACCAATTACGGCTACTGAAGATGAAGATGTTGCAGTAGATGCAGTATCTGATTCACAGTCTCTTGAATTACCTCCTGTTATACCGAGAGGTCCAATGCAGTTAGCTGGTGTAGTATCTGATGTAGATGCTGCATCTGTAGCTTTAACTAATATAATAAAGAGCAATCAGCATGGAAATTTGTTTGACCATGAAGTTCTTAATAACATTCTGAACAATCCAGAGATGATTGAGAAGTTGGTTAGAGATTATGGAGCAGCTAATAACTTGCAATATGAACATAATCACGGGTCATCTTCAGCGACGTACTCGCATCCGCATATACCTATTAATCAAGGAGAGACCAATATACCTTCATCGGTTAGTCTTCCAGCAACTTCTTATCCTCCCTCAACTGGAGGTCAAGTGGGACCTGTTGCTACTCAGTGGCTTCCTAGGTCTTCAATAAGTCCAGTTACTGTTTCTCCTCATGTTGAAGTCCCGTCGATAAAGGATGCCAACTACTATAAGAGCTTAATCCAACAACATGGAGGAGACGGAAAAGAAACGCTTCCATATTACAGTAATCGTCAGATGAATCAGCCAGTAACAACTAACCATGGGACAGCACACATTTCTAGATCAAGGGATTCAAAACCAAAGATAATGAAGCCTTGTATCTTCTTTAACAGTTCAAGAGGATGTCGAAATGGAGCTAATTGTGCATACCAGCATGATGTACCGCTCCAGCCACAAGGTGGTGGTGCTATGCCAAGGATACAAAGTTCAAAGAGAATGAAAATGGATAATAGTTAG 1251 0.4253 MRGLQKSKRVTWASSLNLCQVKLFLSEDSPSLVGLSSQDHLQAKRSLPSHPDGAGSDDILPPGFEGTHASSQFEIDLSQIPVVQWINPPKFVLDLAWQVVAGEESKEVEEQHKREMRVLEAIYPRPSSIPPNPAIAIDVEDSHSIDDGQTALIPITATEDEDVAVDAVSDSQSLELPPVIPRGPMQLAGVVSDVDAASVALTNIIKSNQHGNLFDHEVLNNILNNPEMIEKLVRDYGAANNLQYEHNHGSSSATYSHPHIPINQGETNIPSSVSLPATSYPPSTGGQVGPVATQWLPRSSISPVTVSPHVEVPSIKDANYYKSLIQQHGGDGKETLPYYSNRQMNQPVTTNHGTAHISRSRDSKPKIMKPCIFFNSSRGCRNGANCAYQHDVPLQPQGGGAMPRIQSSKRMKMDNS* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1210 416 MobiDBLite consensus disorder prediction 395 416 - -
Lan15g1210 416 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6 1 414 - -
Lan15g1210 416 ProSiteProfiles Zinc finger C3H1-type profile. 365 393 IPR000571 GO:0046872
Lan15g1210 416 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 414 - -
Lan15g1210 416 MobiDBLite consensus disorder prediction 43 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1210 Lan-Chr15 20540470 20545334 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lan15g1210 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1210 - - cam:101501814 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1210 15 20540470 20545334 Lan3g1271 3 24759296 24763877 LSH