Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1209 ATGGGAAAACCTGTCTCATGTTTCAAACTAGTCACTTGCGGCGGTGGCGCGTCGGAGAAAGATGATTCCGAGGTCAAGAATTCCAATGATAAAAGTGGTTGGAGTTTCTGGAAAAAATCTGCAAGGCACCGTGTGCTTAGCAACACTGTGATAACAGAGGCCCCCTCTTCTGCAAATAAGCAGAGTACAGAATGTGATAGTTTTAACTTTCAACGACTTCCTGAACCTAATGTTGTTGAGAAGATTTACACAACACATTCTTCTGATGAGAAGCCTCAGTTATCCTCACTGGAAAGCTCACAAATATCAGAAACAATTGGCATTGAAACTGAGAGTATGGTGTATGACAGCTCACCAGAGTATGCTATTATCATCGTCCAGACTGCCATCAGAGGGTTATTGGCTCAGAGAGACCTGCTACAGCGTAAAAATGTAGTCAAGTTACAAGCTGCTTTTCGTGGGCACTTGGTCCGGAAGCATGCTGTAGGAACCCTGCGTTGTGTTCAAGCCATCATTAAAATGCAGCTCCTTGTGCGAGCTCGTCGTGCTCAGCAGTCACGTCTAGAAGAAAATTTATATCACACAGATGACATTAATGATTCCGCAGAAAAAATGGAGAATGAAAATCACATGACCAAATCTAATGCGACGTACACTTCCATTGAGAGGCTTCTTAGCAATAGGTTTGCTCGTCAGCTGTTGGAATCAACACCAAAGAGGAAACATATCCATGTCAAGTGCAGTCCTTCCAAAAATGACTCTGCTTGGAAATGGTTGGAGAGATGGGTGTCTGTATCATCAAAAGATACTGCTGAGCACAAAAAGTCAAGTTCTCTGACAGATCAATCGGACAGAACCAACGATCGTACTTCTGTTTTTCAATTTGAAACATGCATTCCATCTGAAGTTTTTCTCCAGTCAGCTGACTCAAAGCCCGCTGTTGAGGGTTCCCTTTTGCCTTCTGGTGATGAAGAGAAGCTGACTAGTTACGATGCAAATAACTCAGGCTTTCAAGGAAGCTGCTCTACTGCATCTCTTGTGGAAGATGACTTGGAACAAGTTCACCCTGAAAAGTCAAATGCATATTATGGTTATGTAAAATCTGCTGAAATTGATATTTTCCAAAATGAAAATTCAGCATCAGACTCAACTGCTCCACCAGAGCTTAATTCTCTTCTTGAAAAACCTGAAATAGATGGTGAGCAGCGCAAACGATCTATGAAAACATTTGCCTCAGACCAACTAGAAGCTGAAGGAAATAAATCTGTACATGGATCTAGAAAGGTCAGTAATCCTGCATTTACTGCTGCACACTCAAAATTTGAAGAGCTTAGTTCAGTGACAGCTTCAGGTATGACAAGCATTTTGTCCAATCAAGAGGCAACTGTTGAATCACAAGCAGACATCTCTTCTGTCAGCACAAACACTGCATGTCGATCAAAAGAGTTCCCATCAGAGAATCCCGTTCCCTATATTTCAAGGGTTGGGGATTCTGAATGTGGTACTGAACTCTCTATTTCTTCCACTCTGGATTCACCTGATGTATCAGAGGCTGGTGCTGTTGAAAATGAGCGAGATGCCAAAGATGTAGAAGGGATTGGTAATCTTGAGAACACAATAAATCATGATGTTGAGGCTAATGTTCCATGTATCATTCCTGCTTCAAGCTTAGCTACATCTGTTTTGGATCAGACCCAGATTCTTGATGGCATTAGTGGCAATATGGTTCACTCGGTGGTAGCCGTTGACTCTGAAGAGCCTGCTATTAGGTCTGAGAAAAATTCACCTGACCTGCAGAGAGAGCTGGCAGAGGCTGCTCAGCAAGATTTCAGACCATCTCCAGAAGAAGCTTCACCTAGAAGTTATATGGCTTTTCCTGAATCACAAGGAACACCTTCAAGTCAGGTATCTATCAAACCTAAAGAGAGCAAAATTGATAAGACTGGATCAAGCAAGAAACGTAGGACCCTGTCAGTGGGTAACAAATCACCGGCAAATTCAAATCACGATTCAGGCTCAAGAGTTAGTAGGGAGAAACTGCCTAAAGATCAGCAGAGTGGCAAGAGACGTAGTTCCATTGGCTTAGTAAAACCTAATCACATCGATCAAGAACCAAGTGATAATATTAGCAACAATAATTCACTTCCCCGTTTTATGCAAGTTACAGAATCTGCTAAGGCCAAGATCAATGCAAATAGCTCTCCAAGATCAAGTCCCGATGTGCATGAAGAAGACATCCAACTTAAGAAAAGACATTCCTTACCTGGTGCCACTGGTAGGCAGTTTTCTCAAGCACAGCAGAATGCAAAAGGGAATAGTGTACATCCTCCACAAGAGAGAAAATGGCTTAGATGA 2355 0.4238 MGKPVSCFKLVTCGGGASEKDDSEVKNSNDKSGWSFWKKSARHRVLSNTVITEAPSSANKQSTECDSFNFQRLPEPNVVEKIYTTHSSDEKPQLSSLESSQISETIGIETESMVYDSSPEYAIIIVQTAIRGLLAQRDLLQRKNVVKLQAAFRGHLVRKHAVGTLRCVQAIIKMQLLVRARRAQQSRLEENLYHTDDINDSAEKMENENHMTKSNATYTSIERLLSNRFARQLLESTPKRKHIHVKCSPSKNDSAWKWLERWVSVSSKDTAEHKKSSSLTDQSDRTNDRTSVFQFETCIPSEVFLQSADSKPAVEGSLLPSGDEEKLTSYDANNSGFQGSCSTASLVEDDLEQVHPEKSNAYYGYVKSAEIDIFQNENSASDSTAPPELNSLLEKPEIDGEQRKRSMKTFASDQLEAEGNKSVHGSRKVSNPAFTAAHSKFEELSSVTASGMTSILSNQEATVESQADISSVSTNTACRSKEFPSENPVPYISRVGDSECGTELSISSTLDSPDVSEAGAVENERDAKDVEGIGNLENTINHDVEANVPCIIPASSLATSVLDQTQILDGISGNMVHSVVAVDSEEPAIRSEKNSPDLQRELAEAAQQDFRPSPEEASPRSYMAFPESQGTPSSQVSIKPKESKIDKTGSSKKRRTLSVGNKSPANSNHDSGSRVSREKLPKDQQSGKRRSSIGLVKPNHIDQEPSDNISNNNSLPRFMQVTESAKAKINANSSPRSSPDVHEEDIQLKKRHSLPGATGRQFSQAQQNAKGNSVHPPQERKWLR* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1209 784 MobiDBLite consensus disorder prediction 672 686 - -
Lan15g1209 784 MobiDBLite consensus disorder prediction 603 784 - -
Lan15g1209 784 MobiDBLite consensus disorder prediction 313 334 - -
Lan15g1209 784 Pfam Protein of unknown function (DUF4005) 704 760 IPR025064 -
Lan15g1209 784 MobiDBLite consensus disorder prediction 654 671 - -
Lan15g1209 784 ProSiteProfiles IQ motif profile. 120 147 IPR000048 GO:0005515
Lan15g1209 784 MobiDBLite consensus disorder prediction 757 774 - -
Lan15g1209 784 ProSiteProfiles IQ motif profile. 141 170 IPR000048 GO:0005515
Lan15g1209 784 PANTHER PROTEIN IQ-DOMAIN 32 1 774 - -
Lan15g1209 784 Gene3D - 119 166 - -
Lan15g1209 784 PANTHER IQ-DOMAIN 5-RELATED 1 774 - -
Lan15g1209 784 MobiDBLite consensus disorder prediction 624 639 - -
Lan15g1209 784 SMART iq_5 140 162 IPR000048 GO:0005515
Lan15g1209 784 Pfam IQ calmodulin-binding motif 142 160 IPR000048 GO:0005515
Lan15g1209 784 MobiDBLite consensus disorder prediction 703 737 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1209 Lan-Chr15 20533181 20539183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1209 109 784 IQD Protein Family AT1G19870 33.522 6.77e-89 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1209 - - gmx:100799424 1034.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1209 15 20533181 20539183 Lan14g0945 14 15852483 15857565 LSH