Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1206 ATGGATGATCCTGGGCATCGTGAAAATGGAAGGCAAAAACCAGATCAATATAAAGCTGCTCAAGGACAGTGGTTGATGCAACATCAGCCTTCCATGAAACAGATTATGGCACTTATGGCTGAAAGAGATGCAGCAGTTCAAGAAAGAAATCTGGCTCTTTCTGAAAAAAAGGCAGCACTTGCAGAGCGTGACATGGCATTCCTGCAGCGAGATACTGCAATTGCAGAACGAAATAATGCAATCATGGAACGAGATAACGCAATTGCAGCTCTTCAATATCGAGAGAGCTCCTTAACTAGCGGTAGCATGTCATCATGTCCTCCAGGATGCCAAATCTCACGTGGTGTCAAGCATGTACATCATCCTCAGCAACAGTTGCACCACTTACACAATATGGATGATGCTTCTTACGGCACACGGGATATGCACACAACTGACGCCCTCCCAGAAGCACACATCCCTTTGGAGGCTGGGAAATCACGACGGGCCAAACGACCGAAGGAAGCTAAGTCAATTTCACCCAATAAAAAGACTTCAAAAACTACTAGAAAGAACAAGATGGAGAGTGAAGACTTGAATGACATGATGTTTGGCAAGACACACGAGTGGAAGAGTGGTCAGGAAATGGTTAATAGAGGGGATGATCTTGACAAGCAGCCACTGGTGTCCAAGGCCGATTGGAAAGGCCAGGACTTGGGGTTAAATCAGGTGGCATATGACGAGTCTACCATGCCGGCTCCAGTTTGCTCTTGTACCGGAGTTCTGAGGCAGTGCTACAAATGGGGTAACGGGGGTTGGCAGTCTGCTTGTTGCACAACAACCCTGTCAATGTATCCACTTCCAGCAGTGCCCAACAAGAGGCATGCCCGGGTCGGAGGTCGGAAGATGAGTGGTAGCGCTTTCAATAAGCTGCTTAGTCGGCTTGCTGCGGAAGGTCATGATCTATCAAACCCTGTTGACCTCAAGGACCACTGGGCCAAACACGGTACGAATCGATACATCACAATAAAGTAG 1014 0.4783 MDDPGHRENGRQKPDQYKAAQGQWLMQHQPSMKQIMALMAERDAAVQERNLALSEKKAALAERDMAFLQRDTAIAERNNAIMERDNAIAALQYRESSLTSGSMSSCPPGCQISRGVKHVHHPQQQLHHLHNMDDASYGTRDMHTTDALPEAHIPLEAGKSRRAKRPKEAKSISPNKKTSKTTRKNKMESEDLNDMMFGKTHEWKSGQEMVNRGDDLDKQPLVSKADWKGQDLGLNQVAYDESTMPAPVCSCTGVLRQCYKWGNGGWQSACCTTTLSMYPLPAVPNKRHARVGGRKMSGSAFNKLLSRLAAEGHDLSNPVDLKDHWAKHGTNRYITIK* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1206 337 PANTHER PROTEIN BASIC PENTACYSTEINE6 1 337 - -
Lan15g1206 337 MobiDBLite consensus disorder prediction 155 174 - -
Lan15g1206 337 Pfam GAGA binding protein-like family 1 337 IPR010409 -
Lan15g1206 337 Coils Coil 51 71 - -
Lan15g1206 337 MobiDBLite consensus disorder prediction 1 20 - -
Lan15g1206 337 PANTHER - 1 337 IPR010409 -
Lan15g1206 337 MobiDBLite consensus disorder prediction 148 190 - -
Lan15g1206 337 SMART GAGA_bind_2 1 337 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1206 Lan-Chr15 20514640 20517528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1206 65 337 BBR or BPC Transcription factor family AT5G42520 65.862 5.75e-120 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Lan15g1206 GAGA_bind 2.1e-107 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1206 15 20514640 20517528 Lan14g0943 14 15839289 15842364 LSH
Lan15g1206 15 20514640 20517528 Lan3g1270 3 24754695 24757837 LSH