Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1202 ATGAAGGCAATTGGGTTATATTGGTCGGCGAGAATGGCTCAAGAGATTCGCAAAAACGACGTCGGATTATCATCGAGTAGTAGTAGTAGCAGCAGACGATTATGGCCTTCTGTTCTCCGTTGGATTCCAACTTCCACCGATCACATCATCGATTCCGAGAAGCGCCTTCTTTCTATTCTCAAGACTCCTTATGTTCAAGAACATGTTAATATAGGTTCTGGTCCTCCTGGCTCAAAAGTCAGATGGTTCCGATCATTGAGCAACAAACCGCGGTTTATTAACACTGTTACATTTGACAGTAAAGATGATTCTCCCACACTTGTAATGGTTCATGGATATGGTGCTTCCCAGGGTTTCTTTTTTCGCAATTTCGATGCTCTTGCCAGTCGTTTCAGAGTTATTGCTGTTGACCAACTAGGCTGGGGTGGATCAAGCAGGCCTGATTTTACATGCAGAAGCACTGAAGAAACAGAGGCATGGTTCATTGATTCTTTTGAGGAGTGGAGAAAAGCCCAAAACCTGAGCAAATTTATACTACTTGGACATTCATTTGGTGGTTATGTTGCTGCAAAATATGCCCTCAAGCACCCTGAGCATGTACAACACTTGATTTTGGTGGGATCTGCTGGATTTTCATCAGAATCAGATGCTAATCAGTCTGAGTGGTTTACAAAGTTTCGAACAACATGGAAAGGATCAGTTATGAACCATCTATGGGAATCTAATTTCACACCACAAAAACTCATCAGGGGTTTAGGTCCTTGGGGTCCTGATATTGTCCGCAAGTATACAAGTGCTAGGTTTGGTACACATTCAACTGGGGAGGTACTGACCGAAGAGGAATCAAGATTGCTTACAGATTATGTTTACCATACGTTAGCGGCCAAAGCTAGTGGGGAGCTGTGCTTAAAGTATATATTTTCGTTTGGAGCATTTACTAAGTCGCCTCTTGTTGGCAGTGCCTCGGAGTGGAAGGTGCCGACGACATTCATATATGGTTTCCAAGATTGGATGAAATATGAAGGCGCCCAAGAAGCTCGCAAGCATATGAAGGTTCCATGTGAAATCATCAGGGTCCCCATGGGTGGCCACTTTGTGTTCATTGACAATCCAAATGCTTTCCATTCTTCTGTGTTTTATGCTTGTAGAAAGTTTCTTACACCTGATCCAGATAATGAACCCCTTCCTCAAGGGCTAACCTTAGCTTAA 1209 0.4326 MKAIGLYWSARMAQEIRKNDVGLSSSSSSSSRRLWPSVLRWIPTSTDHIIDSEKRLLSILKTPYVQEHVNIGSGPPGSKVRWFRSLSNKPRFINTVTFDSKDDSPTLVMVHGYGASQGFFFRNFDALASRFRVIAVDQLGWGGSSRPDFTCRSTEETEAWFIDSFEEWRKAQNLSKFILLGHSFGGYVAAKYALKHPEHVQHLILVGSAGFSSESDANQSEWFTKFRTTWKGSVMNHLWESNFTPQKLIRGLGPWGPDIVRKYTSARFGTHSTGEVLTEEESRLLTDYVYHTLAAKASGELCLKYIFSFGAFTKSPLVGSASEWKVPTTFIYGFQDWMKYEGAQEARKHMKVPCEIIRVPMGGHFVFIDNPNAFHSSVFYACRKFLTPDPDNEPLPQGLTLA* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1202 402 PANTHER RE40534P-RELATED 26 389 - -
Lan15g1202 402 PRINTS Epoxide hydrolase signature 130 145 IPR000639 GO:0003824
Lan15g1202 402 PRINTS Epoxide hydrolase signature 193 206 IPR000639 GO:0003824
Lan15g1202 402 PRINTS Epoxide hydrolase signature 326 342 IPR000639 GO:0003824
Lan15g1202 402 PRINTS Epoxide hydrolase signature 359 381 IPR000639 GO:0003824
Lan15g1202 402 Gene3D alpha/beta hydrolase 91 382 IPR029058 -
Lan15g1202 402 SUPERFAMILY alpha/beta-Hydrolases 94 377 IPR029058 -
Lan15g1202 402 Pfam alpha/beta hydrolase fold 105 371 IPR000073 -
Lan15g1202 402 PRINTS Alpha/beta hydrolase fold signature 130 145 IPR000073 -
Lan15g1202 402 PRINTS Alpha/beta hydrolase fold signature 179 192 IPR000073 -
Lan15g1202 402 PRINTS Alpha/beta hydrolase fold signature 193 206 IPR000073 -
Lan15g1202 402 PANTHER BNAA01G13630D PROTEIN 26 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1202 Lan-Chr15 20486231 20490924 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1202 82 225 Acyl Lipid Metabolism Gene Families AT1G64670 28.000 6.48e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1202 - - gmx:100791981 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g0455 3 4105354 4116824 Lan15g1202 15 20486231 20490924 PCT
Lan15g1202 15 20486231 20490924 Lan3g0455 3 4105354 4116824 PCT