Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1169 ATGCAGGTCGTAGGCTTCTCTTTGGTTCTTTTCTTATTCCTCATATTATCATTCTCATCTCTCTCCTTTGCACTTTCCAATATTGAAGCCTCATTCATTGCACGTCGACAATTGTTACACCTTCATGAAAACGAGGAATTAACTGAATCCTATGTAGAAAGCTACAAAACTGATCTAAAATTTGATAACCCAAGACTTAAAAATGCATATATTGCATTTGAGGCATGGAAAAAAGCAATATATTCTGACCCATCAAACATTACATCTGATTGGGTAGGACCAGATGTTTGTTCCTATAAAGGAGTTTTTTGTGCTCCTGCTCTTGATGATCCTAAGATTGAAGTTGTTGCTGGGATTGATCTTAACCATGCAGACATTGCTGGTTACATTCCTCCAGAGTTTGGTTTGTTAACTGATCTTGCTCTTTTGCATATCAACTCAAATAGGTTTTGTGGTGTTCTCCCAAAGAGTTTTTGCAATCTAAAACTTATGTATGAACTTGATATCAGTAACAATCGTTTCGTAGGTCCATTCCCTCAACCTATACTTTGCCTTCAAGATATTAAATATATTGACCTTAGGTTTAATGACTTTGAAGGGGAACTACCTTCTGAGTTGTTTAACAAGACCCTTGATGCTATCTTTCTGAACAGCAATAGATTTGTGTCCACAATTCCAGAGAATTTAGGGAACTCACCAGCTTCAGTTATTGTCTTGGCTAATAACCATTTCAATGGGTGCATACCTAGAAGCATTGGGAAAATGGACAAGACCTTGAACGAGTTTGTGTTGGTCAATAATAACATTTCTGGGTGTTTACCTGTTGAGATTGGAAAGCTTTCTAACATTGAGGTGTTTGATGTGAGTCACAACATGCTTGTTGGTGTGTTGCCAAATAGCTTACATGGACTTGGAAAAGTGGAAGAGTTATCCATTGCAAATAACAAGTTAACAGGTTCTGTATTACATGGAATTTGTAAGTTGCCTGGTTTGGTGAACTTCACATTCTCTGATAATTATTTCAATGTGGAGGAAGAAGGTTGTGTACCTAAATCTAGAAAGAATATTGATTTGAATGATGAGAGGAATTGTATTCATGGTAGGCCAAAACAGAAGGGTGAAAGTGAATGCAATGTTGTCTTAAGCAAGCCTGTGGATTGTAGTAAGGCTCAATGTGGCCACACATCAACCCCATCTCATTCTAATAATCCTCCAAGTGAAACTCCATCAGAACCAGAACCTGAACCAGAACCCAATCCTACTCCTTCTACCTCTAGTCCTTCAATTGAGACGCCTTCGGAACCAAAATCACCACCACAAACACCTGAAACACAACCAGCACCTACACCGGAAATGCCGAAGGCAACACCTCCACCCACACCAGAAACACAATCACCTCCCACACCAGAAACACCTAAAGGAGAGCCACCATCCACACCACAAACACCTAAACCACACCCACCAGAAACACCTCAATCATCACCACCACCACCTCAGGAGGATGATCCTCACAAAGAAGCACCCAGAGGACGACCAAGGACTCCACCACCAACACATTCTCCTCCTCCACCAGTCCACTCCCCGCCCCCACCAGTCCATTCTCCACCGCCCCCTGTCCACTCACCACCTCCACCGGTGAACTCCCCACCACCCCCCGTCCACTCACCACCTCCTCCAGCAGTCAACTTCCCACCACCACCTGTTCGCTTACTACCCCCTCCACCAGTTAATTCCCCATCACCACCTGTCCATTCTCCACCACCACCAGTCCACTCTCCACCACCACCAGTCCACTCTCCACCACCACCAGTTCACTCTCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCTCCACCAGTCCATTCTCCCCCTCCACCAGTTCACTCACCACCCCCACCAGTTCACTCTCCACCACCACCAGTTAATTCTCCACCACCACCCGTCCACTCCCCACCACCTCCAGTCCATTCTCCCCCACCACCAGTACAGTCCCCTCCACCACCACCTAGACCAACAGTTTCATCTCCTCCTCCTCCTCCAGAAGAAGAAGACATTATTCTTCCACCTCACTTTGGCTCTTCATATGCTTCACCTCCTCCACCAATCATTGCTGGCTACTAA 2196 0.4294 MQVVGFSLVLFLFLILSFSSLSFALSNIEASFIARRQLLHLHENEELTESYVESYKTDLKFDNPRLKNAYIAFEAWKKAIYSDPSNITSDWVGPDVCSYKGVFCAPALDDPKIEVVAGIDLNHADIAGYIPPEFGLLTDLALLHINSNRFCGVLPKSFCNLKLMYELDISNNRFVGPFPQPILCLQDIKYIDLRFNDFEGELPSELFNKTLDAIFLNSNRFVSTIPENLGNSPASVIVLANNHFNGCIPRSIGKMDKTLNEFVLVNNNISGCLPVEIGKLSNIEVFDVSHNMLVGVLPNSLHGLGKVEELSIANNKLTGSVLHGICKLPGLVNFTFSDNYFNVEEEGCVPKSRKNIDLNDERNCIHGRPKQKGESECNVVLSKPVDCSKAQCGHTSTPSHSNNPPSETPSEPEPEPEPNPTPSTSSPSIETPSEPKSPPQTPETQPAPTPEMPKATPPPTPETQSPPTPETPKGEPPSTPQTPKPHPPETPQSSPPPPQEDDPHKEAPRGRPRTPPPTHSPPPPVHSPPPPVHSPPPPVHSPPPPVNSPPPPVHSPPPPAVNFPPPPVRLLPPPPVNSPSPPVHSPPPPVHSPPPPVHSPPPPVHSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPPVHSPPPPVHSPPPPVHSPPPPVNSPPPPVHSPPPPVHSPPPPVQSPPPPPRPTVSSPPPPPEEEDIILPPHFGSSYASPPPPIIAGY* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1169 731 MobiDBLite consensus disorder prediction 513 607 - -
Lan15g1169 731 MobiDBLite consensus disorder prediction 405 425 - -
Lan15g1169 731 MobiDBLite consensus disorder prediction 388 731 - -
Lan15g1169 731 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 7 726 - -
Lan15g1169 731 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 7 726 - -
Lan15g1169 731 Gene3D Ribonuclease Inhibitor 236 378 IPR032675 -
Lan15g1169 731 MobiDBLite consensus disorder prediction 642 710 - -
Lan15g1169 731 PRINTS Proline rich extensin signature 393 414 - -
Lan15g1169 731 PRINTS Proline rich extensin signature 416 432 - -
Lan15g1169 731 PRINTS Proline rich extensin signature 438 455 - -
Lan15g1169 731 PRINTS Proline rich extensin signature 462 487 - -
Lan15g1169 731 SUPERFAMILY L domain-like 77 343 - -
Lan15g1169 731 MobiDBLite consensus disorder prediction 389 404 - -
Lan15g1169 731 MobiDBLite consensus disorder prediction 432 498 - -
Lan15g1169 731 Pfam Leucine rich repeat 258 317 IPR001611 GO:0005515
Lan15g1169 731 Gene3D Ribonuclease Inhibitor 71 235 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1169 Lan-Chr15 20314376 20317047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1169 4 495 Trihelix Transcription Factor Family AT3G19020 55.375 2.03e-174 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1169 - - gmx:100780677 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1169 15 20314376 20317047 Lan14g0910 14 15633278 15635662 LSH
Lan15g1169 15 20314376 20317047 Lan3g1237 3 24519030 24522200 LSH