Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1144 ATGAGTAGTTCTGAGTCGAGAGAAGATGAATCGAAAGAAGAAGACAAAGACAACGAAGCTAACAAACTCCTACAACATCATTCATCATCAACATCATCATCATCGGATAATGAAGAAGAAGTTGCATATGAATCTGGAGATAAAATCACGATCGTAGATTTCGATTATGTAGACGGTGATGAAGATTCAAACGTAACTCCTCCTTTCTCATGGAAAAAGCTATGGATGTTTACGGGACCAGGGTTCTTAATGAGTATAGCGTTTCTGGATCCAGGGAATCTAGAAGGGGATCTTCAAGCTGGAGCAATTGCTGGTTATTCTCTGCTATGGTTGTTGATGTGGGCCACAATTATGGGGCTTTTGATTCAGCTTCTATCAGCTAGAGTTGGTGTTGCCACTGGTCGCCACTTAGCTGAGTTGTGTAGGGATGAATACCCTAATTGGGCGAGGTATGTGCTTTGGTTTATGGCAGAGTTGGCGTTGATTGGTGCTGATATTCAAGAGGTCATTGGAAGTGCAATCGCTATTCAGATTCTTAGCCATGGTGTGTTGCCGCTTTGGGCTGGAGTTTTGATTACTGCTTCTGATTGTTTTTTCTTTCTATTTCTTGAGAACTATGGAGTGAGGAAGTTGGAAGCTGCTTTTGCAGTTCTCATTGCTATTATGGGTCTTTCTTTTGCTTGGATGTTTGGTGACACAAAACCTAATGGAAAAGAACTATTGATGGGTATTTTGCTGCCAAGACTTAGCTCGAAAACAATTCGTCAAGCTGTGGGCGTTGTGGGCTGTGTCATAATGCCTCACAATGTATTCCTCCATTCTGCTTTAGTGCAGTCAAGAAAGATTGATCCCCAAAAGAAAGGCCGTGTGCAGGAGGCTATCAACTATTATTCGATTGAGTCATCGGCTGCACTTTTTGTCTCCTTCATGATTAATCTATTTGTCACAACAGTTTTTGCTAAGGGGTTTTATGGTACGAAGCAGGCAAAAAGCATAGGACTGGTGAATGCTGGGCAATATCTTGAGGAAAAGTATGGTGGAGGACTCGTGCCCATTCTCTATATATGGGGAATTGGGTTATTAGCGGCAGGACAGAGTAGCACCATCACTGGCACATATGCTGGGCAATTCATAATGGGAGGTTTTCTCAACCTCCGCTTAAAGAAATGGTTGAGAGCATTGATCACTCGAAGTTTTGCAATTGTGCCGACTATCATCGTAGCTATTGTTTTTAATACATCAGAATCCTCATTGGACATTTTAAATGAATGGCTTAATGTGCTTCAGTCTATGCAAATTCCTTTTGCATTGATTCCCCTCCTCACCATGGTCTCCAATGAGCAGATAATGGGGCCCTTTAAGGTTGGGCCTGTTCTTGAGCGGGTAGCGTGGACTGTTGCTGCACTGATAATGGTAATCAATGGGTTTCTGTTGTTTGATTTCGTCCTTTCTGAGGTGAAGGGCCTGCTGTTTGGTTTTATAGTCTGCTCCTGCACAGGTGCCTATGTTGCATTCATCGTATATTTGGTTTCACGAAGCGGCGCTCTTCCTTCCACTTGGGCTAATCGACTTCCCAAGGGATTTTCTCTTACTAAAAATTAA 1602 0.427 MSSSESREDESKEEDKDNEANKLLQHHSSSTSSSSDNEEEVAYESGDKITIVDFDYVDGDEDSNVTPPFSWKKLWMFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATIMGLLIQLLSARVGVATGRHLAELCRDEYPNWARYVLWFMAELALIGADIQEVIGSAIAIQILSHGVLPLWAGVLITASDCFFFLFLENYGVRKLEAAFAVLIAIMGLSFAWMFGDTKPNGKELLMGILLPRLSSKTIRQAVGVVGCVIMPHNVFLHSALVQSRKIDPQKKGRVQEAINYYSIESSAALFVSFMINLFVTTVFAKGFYGTKQAKSIGLVNAGQYLEEKYGGGLVPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWLRALITRSFAIVPTIIVAIVFNTSESSLDILNEWLNVLQSMQIPFALIPLLTMVSNEQIMGPFKVGPVLERVAWTVAALIMVINGFLLFDFVLSEVKGLLFGFIVCSCTGAYVAFIVYLVSRSGALPSTWANRLPKGFSLTKN* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1144 533 MobiDBLite consensus disorder prediction 24 39 - -
Lan15g1144 533 Pfam Natural resistance-associated macrophage protein 95 456 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan15g1144 533 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 72 450 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan15g1144 533 MobiDBLite consensus disorder prediction 1 42 - -
Lan15g1144 533 Hamap Divalent metal cation transporter MntH [mntH]. 59 482 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan15g1144 533 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 21 522 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan15g1144 533 PRINTS Natural resistance-associated macrophage protein signature 153 179 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan15g1144 533 PRINTS Natural resistance-associated macrophage protein signature 183 202 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan15g1144 533 PRINTS Natural resistance-associated macrophage protein signature 208 229 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan15g1144 533 PRINTS Natural resistance-associated macrophage protein signature 257 280 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan15g1144 533 PRINTS Natural resistance-associated macrophage protein signature 364 383 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan15g1144 533 PRINTS Natural resistance-associated macrophage protein signature 392 409 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan15g1144 533 PRINTS Natural resistance-associated macrophage protein signature 426 445 IPR001046 GO:0016020|GO:0030001|GO:0046873
Lan15g1144 533 PANTHER BNAC08G04640D PROTEIN 21 522 - -
Lan15g1144 533 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1144 Lan-Chr15 20171443 20176161 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1144 8 513 Inorganic Solute Cotransporters AT1G47240 79.842 0.0 832
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1144 K21398 - gmx:100795013 870.152