Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1143 CTATTCATTTCTTTTTCTAAACCATTGCTCCTATTATTTCTTTGTTGTTTTGCAGTTTCAGCTACTCTCAGATATGGGCATTATGGAGATTCTCATCTTCTGCTTGGGCCTACCTCATCGCGTTTGATCAAGACAAGTTCTATTTTTGTTAAGCAAATTCAAGTATCAAACAAGTTTAATAATCAAGTTACACTTCATGCTTTCAATCAGAAGCCTCACTTAAGCTCCCAAACAAATTGGACTTCCTCAAATTTCTACCTTGTTGCACCACATAGTTGCAAGGGAATTTCTGTGTGGTTAAATAAAGGCTCCACCATCCGTATGATGTGGAAATCACGTTCTAGGAAGAGTTTGAAACAGGTTCATGGGATTGTGGTCAAAGGAGAAAGGAACTTCGAAAAACTGCAGCCTAAACAAACAAGATTCACCTATCCAATTTTAGTTCATGAGACTGCTCGAGGTAAAGAAGCTGAATACATGGTTGAGGAAGATAATACATACAATATTGGGGTTCTAAACATGAATGCCAGGAACATAATATTAACTATGAATGTTAATATTTCGGCAAAGGTATATGATATCACCAAAGCCAATAACATATGCTTTAGTGCAAATGGATCGTGCAGACTCAATTTTATCTTCCCAAAAACGTATTACGTTATTCTTACAGCACCCAACAGCCTAGATGGTGATGAATGGAATGTTGAAGTTTATTTTGTGTCTCGTGCCCTAAGCTACTCATTACTTTTAGGATGTACCATGATTGTTATTTATCTGATAATGAAAGTCCTTAGAGTCTGTGATGGTAATGAAGGAGATACAAATGAGATAATAGCCATCACAAATAGAACACGTAATAGTGTTGCAACAACTCAAACTGAAATTGAGCCATTTGGGGTGTCAAATCGATCATCATATGGAACAAATGAAGAAGATGATGAAGAATCTGAAGTGTCAAATAGCTCTTCAGATGAGTTATATGATGGAAAGTTATGTGTCATTTGTTATGATGAACAACGCAACAGTTTCTTTGTTCCTTGTGGACATTTTGCAACTTGCTATGATTGTTCACAGAGGATTTTCGATGGGGGGAGTAAAAGGTGTCCTATATGCAGAAGGGTTATTGATAAAGTACGAGTATTAATTTATAGTTAA 1155 0.3619 LFISFSKPLLLLFLCCFAVSATLRYGHYGDSHLLLGPTSSRLIKTSSIFVKQIQVSNKFNNQVTLHAFNQKPHLSSQTNWTSSNFYLVAPHSCKGISVWLNKGSTIRMMWKSRSRKSLKQVHGIVVKGERNFEKLQPKQTRFTYPILVHETARGKEAEYMVEEDNTYNIGVLNMNARNIILTMNVNISAKVYDITKANNICFSANGSCRLNFIFPKTYYVILTAPNSLDGDEWNVEVYFVSRALSYSLLLGCTMIVIYLIMKVLRVCDGNEGDTNEIIAITNRTRNSVATTQTEIEPFGVSNRSSYGTNEEDDEESEVSNSSSDELYDGKLCVICYDEQRNSFFVPCGHFATCYDCSQRIFDGGSKRCPICRRVIDKVRVLIYS* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1143 384 PANTHER OS05G0521000 PROTEIN 12 382 IPR044586 GO:0004842
Lan15g1143 384 Pfam Domain of unknown function (DUF4792) 64 132 IPR032008 -
Lan15g1143 384 Pfam Zinc finger, C3HC4 type (RING finger) 330 378 - -
Lan15g1143 384 SUPERFAMILY RING/U-box 324 378 - -
Lan15g1143 384 Pfam Domain of unknown function (DUF4793) 157 259 IPR032010 -
Lan15g1143 384 ProSiteProfiles Zinc finger RING-type profile. 332 372 IPR001841 -
Lan15g1143 384 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 12 382 - -
Lan15g1143 384 MobiDBLite consensus disorder prediction 299 323 - -
Lan15g1143 384 SMART ring_2 332 371 IPR001841 -
Lan15g1143 384 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 306 383 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1143 Lan-Chr15 20165799 20168543 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1143 303 378 C3H Transcription Factor Family AT3G06140 32.895 7.59e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1143 - - gmx:100794488 446.047