Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1142 ATGGAGACACGCGCCGCCAAGAGGAAAGCTATCGCCGCCACCGTTTCTGATATTCACGACCAAAACGTCAAGAAGCAACGCGTTGTGTTGGCTGAAATTTCCAACTTGCCCAGTTTTGATGAGGAACCCAGATGTGTGAAGAATCCAAGGATCAAGAGGGTTGCGGCAAAGAAGAATCTTTCATCTTTTGATTTCGATTTCGAAGATGAGAATAATAATAAAACAGTTGGTAATAGCAGTAATGCAAAATCAAACACTAATGCCAAGTTCAGTGACCCAAATAACTGTGAACCTTTTGTTGAAGATATATATTCGTATCTTTGCAGAATGGAGAGGGAGGGAAAGAGAAGACCAATGTTTAATTACATTGATAAAGTTCAGCATGATGTTACACCTCATATGAGAGGGATCTTAGTGGATTGGTTAGTTGAAGTTGCAGAAGAGTATAAGCTTCTCCCAGACACTCTTTTTCTTTCAACATCGTACATTGATAGGTTTCTGTCCCAAAATCGTGTCTCTAAGCCAAAGCTTCAGTTGTTGGGAGTTTCATCAATGCTCATTGCAGCTAAGTATGAAGAAATAACCCCGCCACATGTGGAAGATTTTGTGTTGATCACTGATAACACTTATGACAAGGCAGAGGTAGTGAAAATGGAAGCTGATATACTCAAATCCCTGAGTTTTGAGATGGGTAATCCTACTGTTAAGACTTTTTTAAGGAGGTTTGTTGGTATTGGTTGTGAGGATAACAAAGCTAAAAAATTGCAGTTCGAGTGTTTATGTAACTATCTTGCTGAGTTAAGTTTGTTGGAGTATTGTTGTTTGAAGTTTTTGCCTTCTTTGGTGGCTGCATCTGCTACATTTCTTGCTAGATATATCATGTGGCCAAAATTGCATCCTTGGACTTCAACCTTGTGTAAATCCACTGGGTATGATGTAGCTGAGTTGAAAGAATGTGTTCTAATCTTACATGACTTGTACTTAGCAAGAAGGGGAGGTTCCTTCTCAGCAATTAGGGAGAAATACAAGCAGCACAAGTTGAAAAAAGTGGCACTTCTACCTTCCCCTCCACAGGTGCCAAATTCTATCTTTGAAGAAGAGTGA 1104 0.3976 METRAAKRKAIAATVSDIHDQNVKKQRVVLAEISNLPSFDEEPRCVKNPRIKRVAAKKNLSSFDFDFEDENNNKTVGNSSNAKSNTNAKFSDPNNCEPFVEDIYSYLCRMEREGKRRPMFNYIDKVQHDVTPHMRGILVDWLVEVAEEYKLLPDTLFLSTSYIDRFLSQNRVSKPKLQLLGVSSMLIAAKYEEITPPHVEDFVLITDNTYDKAEVVKMEADILKSLSFEMGNPTVKTFLRRFVGIGCEDNKAKKLQFECLCNYLAELSLLEYCCLKFLPSLVAASATFLARYIMWPKLHPWTSTLCKSTGYDVAELKECVLILHDLYLARRGGSFSAIREKYKQHKLKKVALLPSPPQVPNSIFEEE* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1142 367 SUPERFAMILY Cyclin-like 91 230 IPR036915 -
Lan15g1142 367 PANTHER CYCLIN-A3-1-RELATED 19 366 - -
Lan15g1142 367 Pfam Cyclin, N-terminal domain 102 230 IPR006671 -
Lan15g1142 367 SUPERFAMILY Cyclin-like 233 357 IPR036915 -
Lan15g1142 367 PIRSF Cyclin_A_B_D_E 2 364 IPR039361 -
Lan15g1142 367 Gene3D - 102 352 - -
Lan15g1142 367 PANTHER CYCLINS 19 366 IPR039361 -
Lan15g1142 367 Pfam Cyclin, C-terminal domain 233 355 IPR004367 -
Lan15g1142 367 Gene3D - 116 231 - -
Lan15g1142 367 SMART cyclin_7 140 224 IPR013763 -
Lan15g1142 367 SMART cyclin_7 237 325 IPR013763 -
Lan15g1142 367 CDD CYCLIN 134 223 IPR013763 -
Lan15g1142 367 SMART Cyclin_C_2 233 356 IPR004367 -
Lan15g1142 367 CDD CYCLIN 233 324 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1142 Lan-Chr15 20160506 20162612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1142 1 366 Core Cell Cycle Gene Families AT1G47230 51.630 3.37e-124 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1142 K06627 - gmx:100776007 402.134