Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1136 ATGGCTCTTCTTCTAGACAACAACAATAACTGTGAAGATATTTTACTCTCTCTTGATTCACACAAATCAGTTCCTGCACCCTTCCTCACCAAAACATACAACCTCGTCGATGACCCAAACACCGATCATGTTGTCTCTTGGGGCGAAAACGACACCACCTTCGTCGTTTGGCGCCCCTCTGATTTCTCTAGAGACCTTCTTCCTAACTATTTCAAACACAACAACTTCTCTAGCTTTGTTCGACAACTCAATACTTATGGTTTTAGAAAGATTGTACCAGACAGATGGGAATTTGCTAATGAATTATTCAAGAAAGGAGAGAAACACTTGCTATGTGAGATCCATAGAAGAAAAACAACGATGCCTCAACAAGTATCAATGAATCATCACCATGATTCTTCACTAGGAATCGATGTTCCTTCTTTCTTTCCCTTCACGAGTAGAGTCAGTATCTCTCCGCCCTATGACTCAGATGAACAACCCAATTGGTGTGACTCTCCGCCGCCCACTTCAGTCATGAACGGTGGCGCTGCTAACTACAACACTTCCGTTACGGCTTTGTCGGAGGATAATGAAAGACTGAGGAGGAGCAACAATATGCTGATGTCAGAGCTTGCAAACATGAAGAAGCTTTATAACGATATTATCTACTTTGTTCAGAACCATGTCAAGCCTGTGGCTCCTAGCAATTCTTATTCACCTTCTTCTTTCATATTTTGTAATGCACCACAACAACAACCATCGTCTAATGTTTCAATGGTGCAAAGGCCAATGAACCAGATTTTGGGTTATTATTCTACTACTACTAACCCTAAGCAATCATTTCAACCACAACATCAAGCACGTGTTCTTAACTCTCCCCCCAACACTTCGATGAGCTCAGTGACTGTTCTTGAAGGGCATAGTAGTAATACCTGCATGACAAAGCTTTTTGGAGTGTCACTACAGTCCAAGAAAAGGGTGCACCCAGAATATGGATCTAATAATTTCACTAACTCAGAGACCAACAAGGCTCGTTTGGTTTTGGAAAAAGATGACTTGGGCTTGAATCTCATGCCTCCTAATTTCTCTTATAAGTAG 1080 0.4157 MALLLDNNNNCEDILLSLDSHKSVPAPFLTKTYNLVDDPNTDHVVSWGENDTTFVVWRPSDFSRDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANELFKKGEKHLLCEIHRRKTTMPQQVSMNHHHDSSLGIDVPSFFPFTSRVSISPPYDSDEQPNWCDSPPPTSVMNGGAANYNTSVTALSEDNERLRRSNNMLMSELANMKKLYNDIIYFVQNHVKPVAPSNSYSPSSFIFCNAPQQQPSSNVSMVQRPMNQILGYYSTTTNPKQSFQPQHQARVLNSPPNTSMSSVTVLEGHSSNTCMTKLFGVSLQSKKRVHPEYGSNNFTNSETNKARLVLEKDDLGLNLMPPNFSYK* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1136 359 Pfam HSF-type DNA-binding 28 117 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lan15g1136 359 PRINTS Heat shock factor (HSF) domain signature 28 51 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lan15g1136 359 PRINTS Heat shock factor (HSF) domain signature 66 78 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lan15g1136 359 PRINTS Heat shock factor (HSF) domain signature 79 91 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lan15g1136 359 SMART hsfneu3 24 117 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lan15g1136 359 SUPERFAMILY "Winged helix" DNA-binding domain 25 117 IPR036390 -
Lan15g1136 359 Gene3D - 20 119 IPR036388 -
Lan15g1136 359 PANTHER BNAC06G00310D PROTEIN 9 352 - -
Lan15g1136 359 Coils Coil 184 211 - -
Lan15g1136 359 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 9 352 IPR027725 -
Lan15g1136 359 ProSitePatterns HSF-type DNA-binding domain signature. 67 91 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1136 Lan-Chr15 20118241 20119758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1136 1 352 HSF AT1G46264 56.300 1.39e-116 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lan15g1136 HSF_DNA-bind 4.4e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1136 K09419 - gmx:100781389 543.502