Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1114 ATGTTTGATATTGAGGATTTCTGGTTACTTCTCCAGCACTTCGTTGGAAAAACAGATCTCATTTCTGAAGAAAAAGAATCGATTTTCCGGTACTTACCAGAATCAATGACGAACTCAACTTGCGGAGGAAAAGGATTAGACATATGCAGAGATGAATCAGCAGCATTTGTTCTCAAATTCGTTGCAATCGCTTCCATTTTACTTGCTGGCTTCGCCGGAGTAGCAATACCTCTCATCGGAAAACACAGCCGATTCCTCCGAACAGATAGCAACCTCTTCGTCGCCGCCAAGGCCTTCGCGGCTGGGGTGATTCTCGCCACCGGATTCGTTCACATGCTTTCAGACGCAACCGACGCGCTCAACGACCCGTGTCTTCCTGAGTTTCCTTGGTCCAAGTTTCCGTTTACCGGTTTCTTCGCAATGATGGCAGCGTTATTCACACTTCTTCTTGATTTCGTTGGAACACAGTATTATGAGAGGAAGCAAGGAGTGAACCGGGCCACAGAGGAACAAACTCGGGTCGGGTTTATTGAATCGGGTGAGGAATCTTCAGCAATTGGTGGGAAGGTGTTTGGGGAAGAAGAGAGTGGTGGAATGCACATAGTGGGGATGCATGCACATGCGGCGCATCATAGACATAACCACCCTCATGGACAAGATGCTTGTGGCGGCGCTGCCAAGCAACATGGCCACGCGCACGGACATGCGCATGGACACGCGCAATCGCTTAGTGATGTTGCTGAGGATGAACCTGACGTACGACACGTTGTCGTTTCGCAGGTGCTGGAGCTTGGGATTGTATCACATTCAGTGATAATTGGGTTGTCTTTAGGAGTTTCACAAAGTCCTTGCACCATAAGACCTCTAATTGCTGCACTCTCTTTCCATCAGTTCTTTGAAGGGTTCGCACTTGGAGGGTGCATCTCCCAAGCACAATTTAAGAACTCATCAGCAGCAATAATGGCTTGTTTTTTTGCACTCACTACCCCTTTGGGTATTGGCATTGGAATAGGCATTGCTTCAGTGTATAACCCTTATAGTCCAGGGGCACTCATCGCTGAAGGTATCTTAGATTCATTGTCAGCAGGGATTTTAGTGTATATGGCTTTAGTGGACTTAATAGCTGCTGATTTTCTTAGCAAAAGAATGAGTTGTAACTTTAGGCTACAGATAGTTTCTTACTGTATGCTTTTCCTTGGGGCTGGGTTGATGTCTTCCCTCGCAATCTGGGCGTGA 1236 0.4709 MFDIEDFWLLLQHFVGKTDLISEEKESIFRYLPESMTNSTCGGKGLDICRDESAAFVLKFVAIASILLAGFAGVAIPLIGKHSRFLRTDSNLFVAAKAFAAGVILATGFVHMLSDATDALNDPCLPEFPWSKFPFTGFFAMMAALFTLLLDFVGTQYYERKQGVNRATEEQTRVGFIESGEESSAIGGKVFGEEESGGMHIVGMHAHAAHHRHNHPHGQDACGGAAKQHGHAHGHAHGHAQSLSDVAEDEPDVRHVVVSQVLELGIVSHSVIIGLSLGVSQSPCTIRPLIAALSFHQFFEGFALGGCISQAQFKNSSAAIMACFFALTTPLGIGIGIGIASVYNPYSPGALIAEGILDSLSAGILVYMALVDLIAADFLSKRMSCNFRLQIVSYCMLFLGAGLMSSLAIWA* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1114 411 PANTHER ZINC/IRON TRANSPORTER 36 411 - -
Lan15g1114 411 Pfam ZIP Zinc transporter 57 408 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lan15g1114 411 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 36 411 - -
Lan15g1114 411 MobiDBLite consensus disorder prediction 212 245 - -
Lan15g1114 411 TIGRFAM zip: ZIP zinc/iron transport family 44 411 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1114 Lan-Chr15 19973922 19976501 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1114 10 411 Inorganic Solute Cotransporters AT1G60960 66.827 1.63e-177 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1114 K14709 - gmx:100812212 597.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1802 6 29357799 29359483 Lan15g1114 15 19973922 19976501 PCT
Lan15g1114 15 19973922 19976501 Lan6g1802 6 29357799 29359483 PCT