Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1108 ATGGGTGCTTCAGGAAAATGGGTCAAAGCATTAATCAGAGTCAAGAAGCCAGACAAGGTGTATGATCACGTGAAGGAAAGTGGTAAGAACAAGAGGTTTAGGTCATGGAAAAGTTCCACTACTTGTTCTTCTCATTCTGGGGATTCTCCTTTATCTGTAGTAGAAGTTGATAGTTATACAGCAGCAGTGGCCACAGTGATTCGAGCTCCTCCTAAGGATTTTAGACTTATCAGGCAACAATGGGCTTCTATCAGAATCCAAACTGCTTTTCGCGCCTTCTTGGCAAGAAGGGCTTTGAGGGCATTAAGGGCAGTGGTGAGAATTCAAGCTCTTGTGAGAGGTAGGCAGGTAAGGAAACAGGCTGCAGTGACATTAAGGTGTATGCAGGCCCTGGTTCGTGTTCAAGCACGAGTAAGAGCTCGTCGTGTGCGCCTGTCCATAGACGGCCAAGCAGTCCAGAACATCCTTAATGAGCGGCGTACCACGTCGGATCTCTTGAAGCAAGCAGAGGAAGGGTGGTGTGATAGCACAGGAACATTGGAAGAAGTTAAAGCAAAAATACAAATGAGGCAAGAAGGGGCTTTCAAGAGAGAGAGAGCAATAGCATATGCACTTGCTCAGAAGCAAGGGAGATCAGCACCAAGCTCTAATTCAGCCACACTATCCTCTCTGAAGAATCACGGAAGCGACAAATCTAACAGGGGATGGAGTTGGTTGGAACGTTGGATGGTAGCGAAGCCTTGGGAGAGTAGATTATTGGAACAATCTCAAGCTGAAAGCTCAGATAAAAGTAAAACCACACCAACACCTCCAAAGAAATTTGTGGACTCCTTTCTAACAAACTCAAATTCGAAACCATCAGTAGAACCATGCTTTATCACAGTCAAGAAGAATGAGGTCAATGCAAGTATTTCTGCTCGGCCTCGTCTCCATATCGGACAAGCACAAGCTATGCGTTCATTCTCGAGTCCAAGTTCTGAATTTCTTTATGGTGAGAGTTCTGCATCTTCTTCTTTTTGTACATCTACAACACCAATATCTGGGAACAGTTGTGATAGGACTGAGGATAGTAGTAACACTAGGCCTAGCTACATGAACCTGACGCAGTCAACCAAGGCGAAGCAAAGGAGGAATCAAATGTATAACAGATTTCAAAGGCAACAGTCCATGGATGAGTTTCAATTTCTTAAAAAGTGTACCATTTTCTCTAATGGGGATTCCAAAAGCAATGTTGATTCTGATCCTTCAATCAACTTCTTTAGGCCACTTTGCCTATCAACTAACTCACTTGGATATGAGCTCAGTGAAGCCAAGGTGAGAAGTGAAAAATCTCTGCTGCCTATGTAG 1347 0.441 MGASGKWVKALIRVKKPDKVYDHVKESGKNKRFRSWKSSTTCSSHSGDSPLSVVEVDSYTAAVATVIRAPPKDFRLIRQQWASIRIQTAFRAFLARRALRALRAVVRIQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRLSIDGQAVQNILNERRTTSDLLKQAEEGWCDSTGTLEEVKAKIQMRQEGAFKRERAIAYALAQKQGRSAPSSNSATLSSLKNHGSDKSNRGWSWLERWMVAKPWESRLLEQSQAESSDKSKTTPTPPKKFVDSFLTNSNSKPSVEPCFITVKKNEVNASISARPRLHIGQAQAMRSFSSPSSEFLYGESSASSSFCTSTTPISGNSCDRTEDSSNTRPSYMNLTQSTKAKQRRNQMYNRFQRQQSMDEFQFLKKCTIFSNGDSKSNVDSDPSINFFRPLCLSTNSLGYELSEAKVRSEKSLLPM* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1108 448 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 425 - -
Lan15g1108 448 MobiDBLite consensus disorder prediction 253 280 - -
Lan15g1108 448 ProSiteProfiles IQ motif profile. 79 107 IPR000048 GO:0005515
Lan15g1108 448 MobiDBLite consensus disorder prediction 209 232 - -
Lan15g1108 448 PANTHER IQ-DOMAIN 5-RELATED 1 425 - -
Lan15g1108 448 MobiDBLite consensus disorder prediction 207 232 - -
Lan15g1108 448 ProSiteProfiles IQ motif profile. 103 130 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1108 Lan-Chr15 19940397 19943655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1108 1 427 IQD Protein Family AT2G26180 52.027 2.60e-122 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1108 - - gmx:100799714 496.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1108 15 19940397 19943655 Lan14g0859 14 15267104 15269876 LSH
Lan10g0911 10 13597657 13600238 Lan15g1108 15 19940397 19943655 PCT
Lan15g1108 15 19940397 19943655 Lan10g0911 10 13597657 13600238 PCT