Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1104 ATGTCTATCGTCCAGCATGGGTCATCCTTAAACGTCACAATGGTGGCTGTTGATAAAGACAAGAATAGTGCTTATGCATTTCGTTGGGCAATTAATCATCTTGATAACCCTGTCATCATTGCTGTCCATGTCAAGCACAAAAACCTTCATCATAACGGCGGCACGAATGTTCACCCACCTGATGAAGAGGATATGGACAATATTTTCAGTGCCTTGCGTGGAATGTGTAACCGTAAAGCCGTGGAGGTTAAAGAAGCGGTCATCGATGATATTGATATTGTGAGAGGACTTCAGGAATATGCACATAGGAATTTAGTACATAGTATTGTTGTTGGTGCATCCAGAAACTCTTTGTCAAGTCTCAAAAAATTGAAAGGCTATGATGTACCAACAGCCATGCTCAAAACAGCCCCAGATTATAGTTCTGTATATGTGATTTCCAAGTGGAAGATTGTGCAAGCTCGATCAGCAATTCGCCCAATGGCAAATGTTCCTATCCCACCAAAAAACCCACTTATGCATCCAATCCCATATAATGAATCAGAAAATGGAACAAGGATTCCACCATATCATCCTAATGGAATGTATTATGAAAAGAACAATTATAATGCATCTAGAAGACCAAGGAGTGCTGGAAGTAATCAATCAATGGACCATATTGATATAGCAGCTCGATCAAGACACATGTCAATGGATGAAAAAGACATTATTCCAGGGGTTATGTCAATGGATTTAAGTAAACAAAATTTAGATTTATCAGAATCCCATGGGAACTCACCAATATCCCAATCCTCAAAAGAAATGGAAGCTGAGATGAAGAGACTGAGGCTTGAACTGAAGCAAACTATGGACATGTATAGCTCAGCATGCAAACAAGCAATCTCAGCAAAAAATCAGGCTGAACAGATTCGCCAATGGAAACTGAAAGAGGAACGAATGGTTGAGGAATCAAGGTTATCTCAAGAGGCAGCTCTTGCAATGGCAGCACAGGAGAAGTTAAAAGCCATAGCTGCATGGGAAGAAGCTGAGGAAGCAAAGAAGAAGGCTGAAAGGGAAGCAAAGAAAAGAAGGGAAGCTGAGATGAAGGCTAAGAAAGAAGCAGAAGAGAAGGATCGAGTATTAACCGCATTGGCTCAAAATGATAATCGATATAGAAGATACACCATAGAAGAGATTGAAGTAGCTACTGATCAGTTTTCTTCATCAAAGAAAATAGGTGAAGGTGGATATGGACCTGTATATAAAGGCAAACTTGATCACACCCCAGTTGCAATCAAAATTCTAAGCCCTGATGCTTCTCAGGGCAGGAAGCAGTTTCAACAAGAGGTTGAGGTACTTAGCCGTATTAGACATCCTAATATGGTGCTTCTTCTTGGTGCTTGTCCTGAATATGGGTGCTTGGTGTATGAACACATGGACAATGGTAGCTTAGATGACAGATTGTTTCGAAGAAATAACAGCCCACCTCTTTCATGGAGGAAACGGTTTCAAATATCTGCTGAGATTGCAACTGCACTTCTTTTCCTTCACCAAACAAAACCTGAGCCCCTTGTCCACAGAGACCTTAAACCAGCAAACATTTTATTGGATAGGAATTATGTCAGTAAAATTGCTGATGTTGGTCTTGCACGATTAGTCCCTCCTTCTGTAGCTGATACAGTAACACAATATTACATGACTTCAGCTGCTGGAACCTTTTGCTATATTGATCCTGAGTATCAAAGTTCAGGAATGTTAACACCAAAATCAGATATATATTCATTTGGGATAATGCTACTGCAAGTAATCACAGCCAGACCTGCTATGGGACTTTCTCACCAAGTCAAGAGGGCAATTGAGAAGGACAACTTTGAAGAGATACTTGATCCTACGGTCACTGATTGGCCAGTTCAAGAAGCTCTTGAATTTGCCCAATTAGCATTACAGTGTGCTGAACTCAGAAAGAAGGACAGGCCAGATCTTGCAAAAGTTTTATTGCCAAAGCTTAGTAGTTTAAGAGAGTTTGCAAATGCTTCTCACAATAATCAAGTTTCTTGCAGTGTTGATCAAATGAATAGCTATCTTGCACGCCCTCTTTAA 2079 0.4036 MSIVQHGSSLNVTMVAVDKDKNSAYAFRWAINHLDNPVIIAVHVKHKNLHHNGGTNVHPPDEEDMDNIFSALRGMCNRKAVEVKEAVIDDIDIVRGLQEYAHRNLVHSIVVGASRNSLSSLKKLKGYDVPTAMLKTAPDYSSVYVISKWKIVQARSAIRPMANVPIPPKNPLMHPIPYNESENGTRIPPYHPNGMYYEKNNYNASRRPRSAGSNQSMDHIDIAARSRHMSMDEKDIIPGVMSMDLSKQNLDLSESHGNSPISQSSKEMEAEMKRLRLELKQTMDMYSSACKQAISAKNQAEQIRQWKLKEERMVEESRLSQEAALAMAAQEKLKAIAAWEEAEEAKKKAEREAKKRREAEMKAKKEAEEKDRVLTALAQNDNRYRRYTIEEIEVATDQFSSSKKIGEGGYGPVYKGKLDHTPVAIKILSPDASQGRKQFQQEVEVLSRIRHPNMVLLLGACPEYGCLVYEHMDNGSLDDRLFRRNNSPPLSWRKRFQISAEIATALLFLHQTKPEPLVHRDLKPANILLDRNYVSKIADVGLARLVPPSVADTVTQYYMTSAAGTFCYIDPEYQSSGMLTPKSDIYSFGIMLLQVITARPAMGLSHQVKRAIEKDNFEEILDPTVTDWPVQEALEFAQLALQCAELRKKDRPDLAKVLLPKLSSLREFANASHNNQVSCSVDQMNSYLARPL* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1104 692 Gene3D Phosphorylase Kinase; domain 1 345 471 - -
Lan15g1104 692 ProSiteProfiles Protein kinase domain profile. 399 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g1104 692 Pfam Universal stress protein family 14 121 IPR006016 -
Lan15g1104 692 SUPERFAMILY Protein kinase-like (PK-like) 383 658 IPR011009 -
Lan15g1104 692 Coils Coil 265 285 - -
Lan15g1104 692 Gene3D Transferase(Phosphotransferase) domain 1 472 687 - -
Lan15g1104 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 517 529 IPR008271 GO:0004672|GO:0006468
Lan15g1104 692 Pfam Protein tyrosine and serine/threonine kinase 402 657 IPR001245 GO:0004672|GO:0006468
Lan15g1104 692 CDD STK_N 12 148 - -
Lan15g1104 692 PANTHER OS02G0152300 PROTEIN 12 678 - -
Lan15g1104 692 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 12 678 - -
Lan15g1104 692 SMART serkin_6 399 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g1104 692 Coils Coil 332 371 - -
Lan15g1104 692 CDD STKc_IRAK 405 658 - -
Lan15g1104 692 Gene3D HUPs 2 138 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1104 Lan-Chr15 19913179 19917742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1104 85 679 Receptor kinase-like Gene Family AT5G12000 57.649 0.0 685
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lan15g1104 PK_Tyr_Ser-Thr 8.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1104 - - gmx:100798861 856.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1104 15 19913179 19917742 Lan3g1142 3 23736121 23741108 LSH