Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1103 ATGGAGGACATGCCTACCGCAGTTGCAGTGCCTTTAAGAGTAGATAATTTAGTGTGTGATAAGTCGAGAATAGCTGCACACATGGATGTATCAAGACTTAAGATGATGACAAATGCTGGGTTTTTATCTAATTCTATAACTAAGTTTTCCACGGAGGCGGTTATAGGTTCTGAAGAAGATCATAATGGTTGCAATATGGATGATGGCTTTTGTATTGTCGCAGTCGCACTCATGCCACCGAAACAGGGAGGAAATAGAGAAGTTCCTTTCTTGGATACAATATCCCAAAATAAAAGCTCTTTGGTTGTTGGCAATGAAGTTTTAACACCAGAAACCGAGGATGATTCATTATTGTTGGAAGGTGATCCAATTATTGATAGCTCTTGTTTTCTTTCAGTAGTCAGTGATAATGGTAGTGTATGTGGAGATGAGTTGATGGTCACTTATGAAGGTATAGCAGATTTAGGGACAACAAGTTCCATTGACATAGATAAGAGCAATTGTGCTGTCAGTGTTGTTGCTAGAGCTGCTGATTTGGCTGAGTCAAATGTCGAGGCGGATATTATGAGTGAACCCCTAGCTCTAGCAGTGAGCCTTGAGGAAGAGACAGGAATTAGATCCCGCCCAAAGCCTACTATAGTGGTTCTTCATCATCAGCTACCTCTGGAAAAAGGGGTGAGTGGAACAGTTTGTCGGAGTGTTTTTGAATTGGATTGTATTCCACTTTGGGGGTTTACATCCGTGTGTGGAAAAAGACCTGAGATGGAAGATGCAATTGCAGCTGTACCTCGGTTTTTGAAAATTCCTATTCAAATGCTAATTGGTGATAGGGTAATTGATGGAATAAACGCATTCTTTAGTCAGCAGACAACTCATTTCTTTGGAGTCTATGATGGCCATGGTGGCTCTCAGGTGGCAAATTATTGCCGTGATCGTTTACATTTGGCATTTGCTGAGGAAATAGAATTTGTCAAGGAAGGTCTAATAGTTGGAAAAACCAAGGATGATTGTCAAGATCGGTGGAAAAAAGTTTTCACCAATTGTTTTTTAAAGGTTGATGCTGAAGTTGGGGGAAAGGCTAATTGTGAATCTGTTGCCCCAGAAACTGTTGGATCCACTGCCGTTGTTGCTATTATCTGTTCATCTCATATCATAGTTTCAAACTGTGGTGATTCAAGAGCGGTTCTCTGCCGTGGCAAAGAACCCATGGCATTATCTGTCGATCATAAACCAAATCGAGATGATGAACGTGCAAGAATCGAGGCAGCCGGAGGCAAGGTGATACAATGGAATGGTCATCGTGTACTTGGTGTACTTGCAATGTCAAGGTCCATAGGTGATCGATATCTGAAGCCATGGATTATTCCAGAACCGGAAGTTACTTTTCTTCCTCGTGCCAAAGACGACGAATGTCTGATTCTGGCCAGTGATGGTCTGTGGGATGTAATGACAAATGAAGAGGCATGCCACATAGCCCGTAGACGAATACTTCTCTGGCACAAGAAAAATGGCTCGACACTGCCATCAGTAAGGGGAGAGGAAATTGATCCTGCTGCACAAGCAGCTGCAGAGTACCTATCAAACTGTGCTCTTCAGAAAGGAAGCAAAGATAACATCACTGTGATTGTGGTGGATTTGAAAGCTCAAAGAAAATTTAAGAGCAAAACATGA 1671 0.4207 MEDMPTAVAVPLRVDNLVCDKSRIAAHMDVSRLKMMTNAGFLSNSITKFSTEAVIGSEEDHNGCNMDDGFCIVAVALMPPKQGGNREVPFLDTISQNKSSLVVGNEVLTPETEDDSLLLEGDPIIDSSCFLSVVSDNGSVCGDELMVTYEGIADLGTTSSIDIDKSNCAVSVVARAADLAESNVEADIMSEPLALAVSLEEETGIRSRPKPTIVVLHHQLPLEKGVSGTVCRSVFELDCIPLWGFTSVCGKRPEMEDAIAAVPRFLKIPIQMLIGDRVIDGINAFFSQQTTHFFGVYDGHGGSQVANYCRDRLHLAFAEEIEFVKEGLIVGKTKDDCQDRWKKVFTNCFLKVDAEVGGKANCESVAPETVGSTAVVAIICSSHIIVSNCGDSRAVLCRGKEPMALSVDHKPNRDDERARIEAAGGKVIQWNGHRVLGVLAMSRSIGDRYLKPWIIPEPEVTFLPRAKDDECLILASDGLWDVMTNEEACHIARRRILLWHKKNGSTLPSVRGEEIDPAAQAAAEYLSNCALQKGSKDNITVIVVDLKAQRKFKSKT* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1103 556 SUPERFAMILY PP2C-like 234 547 IPR036457 -
Lan15g1103 556 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 114 556 - -
Lan15g1103 556 ProSitePatterns PPM-type phosphatase domain signature. 293 301 IPR000222 GO:0043169
Lan15g1103 556 Pfam Protein phosphatase 2C 286 539 IPR001932 -
Lan15g1103 556 ProSiteProfiles PPM-type phosphatase domain profile. 242 546 IPR001932 -
Lan15g1103 556 CDD PP2Cc 244 546 IPR001932 -
Lan15g1103 556 Gene3D - 229 556 IPR036457 -
Lan15g1103 556 PANTHER ALPHABET, ISOFORM E-RELATED 114 556 - -
Lan15g1103 556 SMART PP2C_4 232 544 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1103 Lan-Chr15 19907525 19911050 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1103 1 556 PP2C-type Phosphatase Gene Family AT1G17550 47.535 5.51e-164 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1103 K14497 - gmx:102662702 802.742