Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1100 ATGAAGCTGCTTCATGAAGCAAAGGCTGTGGAGTTTATAATAATACTAAGTGCATACTATATGATACTTAACTATTATTTTTCATGTCAAATAAGGTACCATACCAGAATGACAGATAAAACCCCAACAATATCAGATTCACCTGATGAAGATTGGTCTTTTGAGCTCTCTGAGTACTTGAAATTCGACAATGATCAATGGCCAGATGATGATCCTGAATCATTTGTTTCTGATCATGTTCTGATGAACACCAATGAAGTAGTAGATAACTTTGGAGGAAGTGGTAGCCAAGTTGAGGGATCTTCTAGTAGAGAACTTATCAATGCCCAAGTAGAGGAGCAGAGAGTTGCATTCAAAACGAAATCTGAGGTGGAAATACTTAATGATGGCTACAGATGGAGAAAATATGGGAAGAAAACGGTCAAAAACAGCCCTTATCCAAGGAATTACTATAGATGTTCTGCGGATCGATGTCCGGTGAAGAAAAGGGTTGAGAGAGATAGGGTTGATCCAAGATATGTTATAACAACCTATGAAGGCAAACATACTCATCTAGTTCCTAACAACCTTGGAAACTAA 579 0.3782 MKLLHEAKAVEFIIILSAYYMILNYYFSCQIRYHTRMTDKTPTISDSPDEDWSFELSEYLKFDNDQWPDDDPESFVSDHVLMNTNEVVDNFGGSGSQVEGSSSRELINAQVEEQRVAFKTKSEVEILNDGYRWRKYGKKTVKNSPYPRNYYRCSADRCPVKKRVERDRVDPRYVITTYEGKHTHLVPNNLGN* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1100 192 SUPERFAMILY WRKY DNA-binding domain 120 187 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan15g1100 192 PANTHER WRKY TRANSCRIPTION FACTOR 59-RELATED 32 186 - -
Lan15g1100 192 SMART WRKY_cls 127 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan15g1100 192 ProSiteProfiles WRKY domain profile. 122 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan15g1100 192 Gene3D WRKY domain 112 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan15g1100 192 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 32 186 IPR044810 GO:0003700
Lan15g1100 192 Pfam WRKY DNA -binding domain 128 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1100 Lan-Chr15 19898536 19899710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1100 58 184 WRKY Transcription Factor Family AT5G26170 50.000 5.65e-39 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan15g1100 WRKY 3.5e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1100 15 19898536 19899710 Lan3g1138 3 23697736 23702575 LSH