Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1095 ATGCACAACATGAGTAATAATTATTTCCTCAATGGAGGAGGAATTGGTGGAGGGTCCGGAGGAAGCAATATATTTGAAGCGGGTCCATCACAAGTGCATGCAGAGAGTTCAACTCAACCCTTACCAAACTGGAATGATAATTTATTAGGGTCACAGAATTTCAACAACAATAACAACAACGTTGACGTCATGCCACTTTCCTATTGGCCTGAGCCACCAACCCGTTTTAGTTGTACGTGTTGTCAAGTTCTGAGAGAGATCCTTCACACCAATGGTAATAACTTCAATAAACTTGAGATTCATGGAAGGCTTGGAATGATATGTCATGCAATTTATCATCAGAATATAAGTGCCTGGAATAACAATTGGGGTTCTTCATCTAACCCTCAAATTCAAATGATTGATTTTAGCACGAAAAACATTCAAGAAATCAAGAATTTCCTAGTGCAATATTGTCTGGGTCAAAGTTCTTCAGGCTATGCTATGGTGCAAGATCCATTCTATGCTTATTATGAGGCCCTCTGCACTGGATTCGATTGGGCTGATGACTTAGATGACTACATCGATTTGAATCCAAATACCTCAGGAGGACAATCCGATGAAATGGAACAAGAGGTTGAGAACGGAAGGGTTTCTAGACTTAACCTTGCAGAGAAGAGAGAGAGAATATCAAAGATGAATTTGAGTGATTTAAGTGATTACTTTCATATGCCTATTGGGGAAGCAGCGAGAAGATTGGACCTTTGTGTTACTGCAGTGAAGAAAGTTTGTCGCAGGGGAGATCTAGAAAGATGGCCTCACAGAAAGATCAAAAGTGTTGTGAAGCAGATAAGAGTACTCAGAAGATCTTTAAATTCAGCAGATGCAATGACAAGGGCAAGAACTGAGGCAGATATTATCAGACTTGAAGAACTAATGAAGCAGCATTGTGGTGGAATTGCCCCAACTGCAATAAATTACAACCCATGA 969 0.4004 MHNMSNNYFLNGGGIGGGSGGSNIFEAGPSQVHAESSTQPLPNWNDNLLGSQNFNNNNNNVDVMPLSYWPEPPTRFSCTCCQVLREILHTNGNNFNKLEIHGRLGMICHAIYHQNISAWNNNWGSSSNPQIQMIDFSTKNIQEIKNFLVQYCLGQSSSGYAMVQDPFYAYYEALCTGFDWADDLDDYIDLNPNTSGGQSDEMEQEVENGRVSRLNLAEKRERISKMNLSDLSDYFHMPIGEAARRLDLCVTAVKKVCRRGDLERWPHRKIKSVVKQIRVLRRSLNSADAMTRARTEADIIRLEELMKQHCGGIAPTAINYNP* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1095 322 PANTHER PROTEIN RKD4 31 311 IPR044607 GO:0003700
Lan15g1095 322 ProSiteProfiles RWP-RK domain profile. 213 293 IPR003035 -
Lan15g1095 322 PANTHER RWP-RK DOMAIN PROTEIN 31 311 - -
Lan15g1095 322 Pfam RWP-RK domain 226 273 IPR003035 -
Lan15g1095 322 MobiDBLite consensus disorder prediction 21 49 - -
Lan15g1095 322 MobiDBLite consensus disorder prediction 24 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1095 Lan-Chr15 19871910 19890775 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1095 179 299 AtRKD Transcription Factor Family AT4G35590 29.545 1.69e-10 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Lan15g1095 RWP-RK 1.4e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1095 - - lang:109328222 605.905