Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1094 ATGGATGCTGCTAACAAGCATCAAATAAACATGGCTGAGAACAAAACAGAAGTGGTTGTGACCATTCCAAATTCTGGTGAAGAAAGCCATGATTCCAAAGGAGTTGGATCTTTAACAACTAAGCAATGCAGAGATGATTCACCTCACACAATGTTCAATGATAATGAGGTTACTGCAAAGTCACCACCTTTACATTGTGCTTCTCCTGAGATAAGGTTCAGTCCCAGCCCAAACAAGCCCCCTAGAGTTCCTAATGTGAATGGTAACCTTATCAGAAGAAAATCACTTTCAAGGTCAATGTATTCGAAACCCAAATCAAGGTTTGGTGAACAACCTTATCATATTGATGGTAACATGTTAGAAGATAATAGTATTTCAGCTTTACAAGAACAGTTAGCTGATAATTCGCCATATAGGAACTCTTTCAGTAATGCATCTCCTGGTAACAAACCCGGGCTGGTTAATAGAACCGCTTCTATAACTTCCGTCATCACTCCCAAGACGCCGTTGATGGGGGAGGATGAGGGAGAAATCATTTACAGGAAAGTGGAATTGAGTAAAGGAAAACGTAAGAGAGTGAAAACAAAGGTTTTAATAGAATGGTTTATATTTGTGTACCTTGTGTCGAATCTCGTGGCTAGCTTAACAGTTGATAAACTGAAAAGTACATCTATTTGGGGTTTAGGGGTTTGGAGATGGACTGTGCTTTTGATGGTAACTTTTTGTGGCCACTTAGCTACTAGATGGTTCATGCGCATTGTTGTTTTCTTGATCGAAATAAACTTTCTGTTGAGGAAAAAGGTGCTGTATTTTGTTCATGGGCTTAAGAAAAGTGTCCAGGTCTTCATTTGGCTTGCTTTGGTTCTTCTCACGTGGGTGCTGTTAATCAATCATGTGGTGCGGCGATCTAAATTGGCCACAAAAGTTTTGGACGCTGTAACTTGGACTCTTCTCTCCCTTCTCATTGGAGCATTCTTTTGGTTGTTGAAGACATTGTTACTAAAGATTTTGGCATCAAATTTCCATGTCAAATCTTTTTTTGATCGAATTCAAGAAGCAATCTTCCACCAGTATGTTTTGCAGACTCTCTCTGGGCCTCCACTCATGGAAGATGCTGAGAAGATCGGGGGATTGCGAAGTGTTGGTCAATTTAGTTTCAGGAGTACAGCAGGGAAAGGTGGTAAAAATAAAGACGTTATAGATATGGCAAAGCTTCACAAGATGAAACAGGAGAAAGTTTCTGCTTGGACTATGAAGATTTTGGTAGATGCAGTGATGAATTCAGGACTATCCACAATCTCTAATTCACTAGATGAAAGTTTCTATGATGGAGGAACTGACCCAATTGATAAAGAGATAACGAATGAGATGGAAGCAACTGCCGCTGCCTATTCCATATTCAGGAACGTTGCTGGCCCTGGTTGTGAGTACATTGATGACTACGATCTCCGGAGGTTCATGATTAAGGAAGAAGTGGATCTGGTATTGCCCCTACTGGCACAAGTAGAGACAGGACAAATCAACAGAAAGTCTTTAACAGAATGGGTGTTGAAGGTATATCAGGAACGTAAAGCACTAGCACATGCCTTATGTGACACCAAAACTGCTGTAAAGCAATTAAACAAGCTTATAACGGGGATCCTAGTGGTGGTGTCAATAGTAGTGTGGCTTCTACTAATGGGGATTGCAACAACAAAAGTACTTGTATTCCTCTCATCGCAGCTAGTGCTCTCAGCTTTCATGTTTGGAAACACATGCAAGAATATTTTTGAAGCTATCATCTTCGTGTTTGTAATGCATCCATTTGATGTCGGTGATCGATGTGTGATAGATGGTGTTGAGCTACTGGTTGAAGAAATGAATATATTGACAACTGTCTTCTTGAAGCTTAATAACGAAAAGGTTTACTTTCCAAACTCAGTCCTAGCGACAAAACCGATCAGCAATTATTACAGAAGCCCTGATATGGGTGATAGTGTAGAATTCTCGATTGATTTTCTGACACCAGTGGAGAAGATTGGGGCACTCAAAGAAAAAATAACAGAGTACATGGATGGCAATCCACAGTACTGGCATCCTAATCACAACTTAGTAGTAAAGGAGATTGAAAATGTCAACAAGATTAAGATGGGTTTGTATGTTACCCACACAATGAACTTTCAAGACTTCGGGCAAAAGACCAAGCGAAGAAGTGAACTTGTGATGGAAGTAAAGAAAATATTTGAAGAGCTCAATATCAGATACAACCTTCTTCCTCAAGGTGTTCATCTCAGACACATGGAATCAGATAAAACTGTACTCAAGTAA 2307 0.3997 MDAANKHQINMAENKTEVVVTIPNSGEESHDSKGVGSLTTKQCRDDSPHTMFNDNEVTAKSPPLHCASPEIRFSPSPNKPPRVPNVNGNLIRRKSLSRSMYSKPKSRFGEQPYHIDGNMLEDNSISALQEQLADNSPYRNSFSNASPGNKPGLVNRTASITSVITPKTPLMGEDEGEIIYRKVELSKGKRKRVKTKVLIEWFIFVYLVSNLVASLTVDKLKSTSIWGLGVWRWTVLLMVTFCGHLATRWFMRIVVFLIEINFLLRKKVLYFVHGLKKSVQVFIWLALVLLTWVLLINHVVRRSKLATKVLDAVTWTLLSLLIGAFFWLLKTLLLKILASNFHVKSFFDRIQEAIFHQYVLQTLSGPPLMEDAEKIGGLRSVGQFSFRSTAGKGGKNKDVIDMAKLHKMKQEKVSAWTMKILVDAVMNSGLSTISNSLDESFYDGGTDPIDKEITNEMEATAAAYSIFRNVAGPGCEYIDDYDLRRFMIKEEVDLVLPLLAQVETGQINRKSLTEWVLKVYQERKALAHALCDTKTAVKQLNKLITGILVVVSIVVWLLLMGIATTKVLVFLSSQLVLSAFMFGNTCKNIFEAIIFVFVMHPFDVGDRCVIDGVELLVEEMNILTTVFLKLNNEKVYFPNSVLATKPISNYYRSPDMGDSVEFSIDFLTPVEKIGALKEKITEYMDGNPQYWHPNHNLVVKEIENVNKIKMGLYVTHTMNFQDFGQKTKRRSELVMEVKKIFEELNIRYNLLPQGVHLRHMESDKTVLK* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1094 768 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 12 758 IPR016688 -
Lan15g1094 768 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 9 12 758 - -
Lan15g1094 768 MobiDBLite consensus disorder prediction 25 46 - -
Lan15g1094 768 Pfam Mechanosensitive ion channel 542 747 IPR006685 GO:0016020|GO:0055085
Lan15g1094 768 Gene3D - 601 650 IPR023408 -
Lan15g1094 768 PIRSF Memb_At2g17000 1 767 IPR016688 -
Lan15g1094 768 SUPERFAMILY Sm-like ribonucleoproteins 591 650 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1094 Lan-Chr15 19871774 19875379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1094 59 757 Mechanosensitive Ion Channel Family AT5G12080 60.740 0.0 860
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1094 K22048 - gmx:100803107 1111.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1094 15 19871774 19875379 Lan3g1134 3 23673525 23676457 LSH