Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1087 ATGGTTATGGCATTTTGGTTTGGACTCCTTCTTCTTCGTTTTCTTCTTTGTTTGAATGCAATTTCAGTAGATTCAGATGATGGAGCTACATTGTTGGAACTAAAGAAGTCATTAAGGGATGTGGATAATGTTCTATATGACTGGACGGACCCACCATCATCAGATTATTGTATGTGGAGAGGGGTCACATGTGATGATGTCACCTTCAATGTTGTTGCACTTAATCTTTCAGGATTGAATCTTGAGGGCGAAATTTCACCTGCAATAGGGAGCCTTAACAGCTTGGTTTCAATTGATCTCAAGGAAAATCGTCTATCAGGCCTGATTCCGGATGAGATTGGCGATTGTTCTTCTCTGAAAAGCTTGGACTTGTCACTTAATGAGATTCATGGAGATATACCGTTTTCGATCTCAAAGATGAATCAACTAGAAAATCTAATTTTAAGAAATAACAAGTTAATTGGTCCAATTCCTTCAACTCTGTCTCAGATTCCTAACCTGAAGATCTTAGATCTGGCACAAAATAATCTGAGTGGGGAGATACCAGAACTTATATACTGGAATGAAGTTTTGCAGTATATTGACCTGGGAGATAACCATTTGGTTGGCTCACTCTCTCCGAACATGTGTCGGTTAACTGGATTGTGGTACTTTAATGTGCACAACAATAGCTTGACAGGAAGTATTCCTGAAAACATAGGCAACTGTACTACCTTACAAATCTTGGATTTATCCTTCAATCAGCTAACAGGGGAGATACCATACAATATTGGATTCCTGCAAGTAGCGACGCTGGCATTGCAAGGCAATAAACTCTCGGGGCGTATTCCACCTGTGATTGGTCTAATGCAAGCACTTGATATCTTAGATTTGAGGAATAACATGTTAAGTGGACCAATTCCTCCTGTCTTGGGAAATTTGATTTACGCCAAAATATTGTATTTGAATGGAAACAGGCTAACTGGTTCCATCCCCCCAGAGCTCGGAAACTTGACAAATGTTCACTATCTTGAACTGAGTGATAACCATTTAAGTGGACATATCCCACCCGAGCTTGGAAAGCTTACTGATCTGCTTATCTTAAATGTTGCTAACAACAACCTTGAGGGTCCGATTCCTGACAATATTAGCTCATGTAGAAATCTTAACAGCCTCAATGTCAATGGGAATAAGTTGAACGGAACAATCCCCCTCGCCTTTCATACCTTGGAGAGTATGACCTATCTGAATCTTTCTTCCAACAATCTTCAAGGGTGCATTCCAATTGAACTGTCCCTGATTGGCAATTTAGATACATTGGATATTTCAAATAATAATATAAGTGGCTCCATTCCTTCTTCTCTTGGAAACTTGGAGCACCTTCTAAAGCTGAGTCTGAGCAGAAATCATTTAACAGGATCTATTCCAGCAGAATTTCGCAATCTTAGAAGTGTTATGCGCATTGACCTTTCAAATAATCAACTATCTGGCTTGATTCCTGAAGAACTTAGTAAGCTTCAGAACATGATATCCTTGAGACTAGAAAACAACAAATTATCTGGGGGTGTGAGACCACTTGCAAATTGTCCAAGTCTTTCTCTGCTCAATGTCTCTTATAACAACCTAACTGGTGTTATTCCCACAAGCAACAACTTTACCAGGTTTCCCCCTGACAGTTTCATTGGAAACCCTGGTCTTTGTGGCTATTGGCTGGGTTCGTCTTGTCACGGGTCTCGCACTGCAGAACGAGTGACATTATCTAAGGCGGCTATCCTTGGAATTGCTATTGGCGTCCTCATGGTTCTGCTTATGATATTACTGGCAGCTTGCCAGCTGCAAAATTCAGCTCCTTTTCCCGACGGATCACTTGACAAATCAGTGAATTACTCACCACCAAAACTAGTGATTCTTGACATGAATATGGCCCTTCATGTGTACGAAGATATCATGAGGATAACTGAAAACCTGAGTGAGAAATATATAATTGGACATGGCGCATCGAGTAAAGTTTATAAATGTGTTCTTATGAATTGCAAGCCAGTGGCTGTCAAGAGGATCTATTCTCAGTATCCACAATACTTGAAAGAATTTGAGACAGAACTTGCGACAATTGGGAGCATTAAGCACCGGAACTTGGTCGCTCTCCAAGGCTATTCCTTGTCTCCATTCGGGAACCTTCTCTTTTACGACTATATGGAAAATGGCAGTTTATGGGATCTTCTTCATGGACCAAACAAGAAGAAAAAACTTGTCTGGGATATTCGTCTTAAAATTGCACTTGGAGCAGCACAAGGGCTAGCTTATCTACACCATGATTGCACACCTCATATCATCCACAGAGATGTGAAATCATCTAATATTTTATTAGACAAAGACATGGAGTCACATATCACCGATTTTGGCATTGCCAAAAGTCTAAACCCCACAAACTCCCACACTTCAACTCACATAATGGGCACAATAGGGTATATAGACCCAGAGTATGCAAGAACTTCCAGGCTCACTGAGAAATCTGATGTGTATAGCTATGGTATTGTTTTACTTGAGCTCTTAACTGGGAGAAAAGCTGTTGACAATGAATCCAATCTCCACCATCTAATTTTATCCAAGACAGCTAACAATGCAGTAATGGAAATTATTGATCCGGATATCACAGCAACATGCAAGGACATTGGAACAGTAAGAAAGGTATTTCAGCTTGCCCTTTTATGCACAAAGACTCAGCCAAATGATAGGCCTGCAATGCATGAAGTGGCACGTATCTTAGAAACTCTTGTGTCATCATCCACCACATTATCAAAACAACCAGCTCCAATTCAAGCACTAAATGAGACACAATCATCTGATAAAAGTGCAATGCTACATTGA 2847 0.4029 MVMAFWFGLLLLRFLLCLNAISVDSDDGATLLELKKSLRDVDNVLYDWTDPPSSDYCMWRGVTCDDVTFNVVALNLSGLNLEGEISPAIGSLNSLVSIDLKENRLSGLIPDEIGDCSSLKSLDLSLNEIHGDIPFSISKMNQLENLILRNNKLIGPIPSTLSQIPNLKILDLAQNNLSGEIPELIYWNEVLQYIDLGDNHLVGSLSPNMCRLTGLWYFNVHNNSLTGSIPENIGNCTTLQILDLSFNQLTGEIPYNIGFLQVATLALQGNKLSGRIPPVIGLMQALDILDLRNNMLSGPIPPVLGNLIYAKILYLNGNRLTGSIPPELGNLTNVHYLELSDNHLSGHIPPELGKLTDLLILNVANNNLEGPIPDNISSCRNLNSLNVNGNKLNGTIPLAFHTLESMTYLNLSSNNLQGCIPIELSLIGNLDTLDISNNNISGSIPSSLGNLEHLLKLSLSRNHLTGSIPAEFRNLRSVMRIDLSNNQLSGLIPEELSKLQNMISLRLENNKLSGGVRPLANCPSLSLLNVSYNNLTGVIPTSNNFTRFPPDSFIGNPGLCGYWLGSSCHGSRTAERVTLSKAAILGIAIGVLMVLLMILLAACQLQNSAPFPDGSLDKSVNYSPPKLVILDMNMALHVYEDIMRITENLSEKYIIGHGASSKVYKCVLMNCKPVAVKRIYSQYPQYLKEFETELATIGSIKHRNLVALQGYSLSPFGNLLFYDYMENGSLWDLLHGPNKKKKLVWDIRLKIALGAAQGLAYLHHDCTPHIIHRDVKSSNILLDKDMESHITDFGIAKSLNPTNSHTSTHIMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTGRKAVDNESNLHHLILSKTANNAVMEIIDPDITATCKDIGTVRKVFQLALLCTKTQPNDRPAMHEVARILETLVSSSTTLSKQPAPIQALNETQSSDKSAMLH* 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1087 948 Gene3D Phosphorylase Kinase; domain 1 618 724 - -
Lan15g1087 948 SMART LRR_typ_2 475 498 IPR003591 -
Lan15g1087 948 SMART LRR_typ_2 451 474 IPR003591 -
Lan15g1087 948 SMART LRR_typ_2 427 450 IPR003591 -
Lan15g1087 948 SMART LRR_typ_2 164 188 IPR003591 -
Lan15g1087 948 SMART LRR_typ_2 331 355 IPR003591 -
Lan15g1087 948 SMART LRR_typ_2 283 307 IPR003591 -
Lan15g1087 948 SMART LRR_typ_2 92 116 IPR003591 -
Lan15g1087 948 SMART LRR_typ_2 212 236 IPR003591 -
Lan15g1087 948 ProSitePatterns Serine/Threonine protein kinases active-site signature. 770 782 IPR008271 GO:0004672|GO:0006468
Lan15g1087 948 ProSiteProfiles Leucine-rich repeat profile. 166 188 IPR001611 GO:0005515
Lan15g1087 948 MobiDBLite consensus disorder prediction 929 948 - -
Lan15g1087 948 ProSiteProfiles Protein kinase domain profile. 649 918 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g1087 948 Pfam Leucine rich repeat 94 153 IPR001611 GO:0005515
Lan15g1087 948 Pfam Leucine rich repeat 429 488 IPR001611 GO:0005515
Lan15g1087 948 SUPERFAMILY Protein kinase-like (PK-like) 628 916 IPR011009 -
Lan15g1087 948 SUPERFAMILY L domain-like 50 302 - -
Lan15g1087 948 Gene3D Transferase(Phosphotransferase) domain 1 725 939 - -
Lan15g1087 948 Gene3D Ribonuclease Inhibitor 444 570 IPR032675 -
Lan15g1087 948 Gene3D Ribonuclease Inhibitor 188 260 IPR032675 -
Lan15g1087 948 Gene3D Ribonuclease Inhibitor 348 443 IPR032675 -
Lan15g1087 948 Gene3D Ribonuclease Inhibitor 261 347 IPR032675 -
Lan15g1087 948 Gene3D Ribonuclease Inhibitor 24 187 IPR032675 -
Lan15g1087 948 SMART serkin_6 649 919 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g1087 948 SUPERFAMILY L domain-like 257 564 - -
Lan15g1087 948 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 929 - -
Lan15g1087 948 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ERECTA 7 929 - -
Lan15g1087 948 ProSitePatterns Protein kinases ATP-binding region signature. 655 677 IPR017441 GO:0005524
Lan15g1087 948 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Lan15g1087 948 Pfam Protein kinase domain 652 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g1087 948 ProSiteProfiles Leucine-rich repeat profile. 429 451 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1087 Lan-Chr15 19836163 19843108 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1087 95 919 Receptor kinase-like Gene Family AT5G07180 63.923 0.0 1065
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Lan15g1087 Pkinase 1.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1087 K20718 - gmx:100804875 1490.32