Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1082 ATGATGAGTTCTAAAAAGATTAAATGGAAGTCTATTGTCTTTATCTTAAGTTGTTACAAGTCAAAATGCACCTTGGAGGAATCAGAAAAGCAAGGTTCTTTGGGAAGGCTATGTCTATCAGATATAAGCATTTCTAGCTCTATTGAAGATCTTTCCATTTCCCTTGTTGGCTCAAGGCTTTACACATTTAGTCTAGAGGAGCTAAGAGAAGCAACACATAATTTTTCATGGAGTAATCATATTGGTGAAGGTGGGTTTGGACCTGTGCACAAAGGTTTTGTTGATGACAGACTTAGACCTGGTTTGAAGGCTCAGCCTGTAGCTGTGAAACAATTGGACTTGGATGGCTTGCAAGGTCATAGAGAGTGGCTGGCAGAGATTATATTTCTTGGACAGTTGAGGCATCCACATCTTGTCAAGTTAATTGGGTATTGTTCTGAAGATGAGCACAGGCTTTTGGTGTATGAATACATGGCTAGAGGCAGCTTGGAGAATCAACTCTTCAGAAGGTACTCTGTTGCTTTGCCATGGTCAACTAGGATGAAAATTGCGTTGGGCGCGGCTAAGGGTCTAGCCTTCCTTCATGAAGCAGATAAGCCTGTAATATACAGGGATTTCAAAGCTTCGAATATCTTACTAGACTCGGATTACACAGCTAAACTATCAGACTTTGGACTAGCTAAGGATGGACCTGAAGGGGAAGACACACATGTAACTACCCGAATAATGGGAACACATGGATATACTGCTCCTGAATACATCATGACAGGTCACCTTACTACTAAGAGTGATGTGTATAGCTATGGAGTTGTTATGCTAGAATTGCTTACTGGAAAAAGGGTAGTGGATAAAACAAGGTCACAGGGACAGAGAAGCCTGGTGGAATGGGCAAGGCCAATATTGCGAGATCATCGAAAGCTGCAGCGTATCATCGACCCGAGATTGGAAGGGCAGTTTCCTACAAAAGGAGCAATGAAGGTTGCTGCATTAACTTATAAATGCTTAAGCCACCACCCAAATCCAAGGCCACCTATGAGTGATGTAGTCAAGATATTGGAGTCACTTCAGGACTTTGATGATGACCTCATTGGACCATTTGTCTATGTTGCAGTAAGTGAAAGTGATCAATGA 1131 0.42 MMSSKKIKWKSIVFILSCYKSKCTLEESEKQGSLGRLCLSDISISSSIEDLSISLVGSRLYTFSLEELREATHNFSWSNHIGEGGFGPVHKGFVDDRLRPGLKAQPVAVKQLDLDGLQGHREWLAEIIFLGQLRHPHLVKLIGYCSEDEHRLLVYEYMARGSLENQLFRRYSVALPWSTRMKIALGAAKGLAFLHEADKPVIYRDFKASNILLDSDYTAKLSDFGLAKDGPEGEDTHVTTRIMGTHGYTAPEYIMTGHLTTKSDVYSYGVVMLELLTGKRVVDKTRSQGQRSLVEWARPILRDHRKLQRIIDPRLEGQFPTKGAMKVAALTYKCLSHHPNPRPPMSDVVKILESLQDFDDDLIGPFVYVAVSESDQ* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1082 376 ProSiteProfiles Protein kinase domain profile. 75 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g1082 376 Gene3D Transferase(Phosphotransferase) domain 1 158 363 - -
Lan15g1082 376 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Lan15g1082 376 SUPERFAMILY Protein kinase-like (PK-like) 49 354 IPR011009 -
Lan15g1082 376 PANTHER KINASE 1B 19 374 - -
Lan15g1082 376 CDD STKc_IRAK 81 355 - -
Lan15g1082 376 Pfam Protein tyrosine and serine/threonine kinase 77 352 IPR001245 GO:0004672|GO:0006468
Lan15g1082 376 Gene3D Phosphorylase Kinase; domain 1 40 157 - -
Lan15g1082 376 PANTHER OS01G0588500 PROTEIN-RELATED 19 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1082 Lan-Chr15 19805634 19808789 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1082 62 352 Glycoside Hydrolase AT3G07070 54.082 1.28e-105 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lan15g1082 PK_Tyr_Ser-Thr 5.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1082 - - gmx:100802636 613.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1082 15 19805634 19808789 Lan14g0839 14 15139804 15152032 LSH