Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1077 ATGGCTAGTGTTGCTTCTGATTCTACTTCTGCTAATGATAATAATAATAACAAGTTATACAAAGGTGTGAGGTTGAGAAAATGGGGGAAATGGGTTTCTGAAGTGAGGTTACCTAATAGCCGTGAAAGGATTTGGCTTGGATCTTATGATTCTCCTGTAAAAGCTGCAAGAGCTTTTGATGCTGCACTTTATTGTCTACGTGGTAGAAATGCAAATTTCAATTTTTCTGATACCCCTTTCAACATGGAGAACAACAATAATGTGGTTTTCTCAGCTGGTGACAAATCTCTTACCTCACAAGAGATTCAAGAGATTGCTTCTAAGTTTGCCAATGAGGACCCACCACCACCACAACCACCACAACATGGTGGTGATATGAATATTAATACTACTTCTAGTACTATTGCTACTACCATGGCTGCTACCACTAGTGTCACCTCATCTTGTTCTACTAATATTTGTGACTATGATGGCATGCAAGTGGACCATGGAGATATGAGTAGAATGGATTGGACATTTTTGGATATGTTGGATAATGAGTACTCTAATGAGGTTCATGTTTGTTCTGATTATTATGGCCTATATTCTGACCTAGACAATGTGCACTCAGGTGAATTTGTGTACTCTACTTTACTACCATCACATTTTGATGATAATGAGCAACAAATTGAAGGTAATAGTGATGTTTTTTCTCACCAATCATTCCTTTGGAATTGGTGA 720 0.3778 MASVASDSTSANDNNNNKLYKGVRLRKWGKWVSEVRLPNSRERIWLGSYDSPVKAARAFDAALYCLRGRNANFNFSDTPFNMENNNNVVFSAGDKSLTSQEIQEIASKFANEDPPPPQPPQHGGDMNINTTSSTIATTMAATTSVTSSCSTNICDYDGMQVDHGDMSRMDWTFLDMLDNEYSNEVHVCSDYYGLYSDLDNVHSGEFVYSTLLPSHFDDNEQQIEGNSDVFSHQSFLWNW* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1077 239 Pfam AP2 domain 20 68 IPR001471 GO:0003700|GO:0006355
Lan15g1077 239 PRINTS Ethylene responsive element binding protein signature 20 31 IPR001471 GO:0003700|GO:0006355
Lan15g1077 239 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Lan15g1077 239 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 4 239 - -
Lan15g1077 239 SMART rav1_2 19 82 IPR001471 GO:0003700|GO:0006355
Lan15g1077 239 ProSiteProfiles AP2/ERF domain profile. 19 76 IPR001471 GO:0003700|GO:0006355
Lan15g1077 239 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF018 4 239 - -
Lan15g1077 239 CDD AP2 18 78 IPR001471 GO:0003700|GO:0006355
Lan15g1077 239 Gene3D AP2/ERF domain 19 77 IPR036955 GO:0003700|GO:0006355
Lan15g1077 239 SUPERFAMILY DNA-binding domain 19 77 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1077 Lan-Chr15 19766638 19767389 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1077 20 111 AP2-EREBP Transcription Factor Family AT1G19210 68.478 6.04e-38 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan15g1077 AP2 1.5e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1077 - - gmx:100817386 221.861