Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1075 ATGGATGGTGCCAATAATCGCCGTCTTGTGCTTCCTATCGGATACAGGTTTTGTCCAAATGATGAGGATTTGGTGAATTTTTACCTCACAAAAAAGGCATTTGGGGAACCAGTTTTTCCTAATATTATTCCTGATATCAATTTCTTTCAGAATCATCCCTCATCATTCCCAGAAGGTGGAAGGTTTTTCCTGGAGAAGAGGTATTTCTTCAGTATAACTAGAAGACCCGTGTTAGTCAACATGCATGAGCAAATAGCTGCTAGTTCTGGATATTGGAGAACTAAAGGGAGAACCAAGGAGATTGTTATTTCTGGGAACGATCAACTCATTGGGATTAAGAACATGTTTGTTTTTTGGGAAGGGAGAGACACCATTCAGACAAAAACAAACTGGGTCATGCATGAGTTTCGTCTTACACACCGTACAACTCCAAACCAACTTCAGGTGGCAGATTGGGCTGTGTATCGCTTATTTCAGGAGAAAAACAAAAGGGCTGAAGGGTCAGATGAGGAGTCCTCTAGAAGGAATGATACTGACACACCTTAG 546 0.4139 MDGANNRRLVLPIGYRFCPNDEDLVNFYLTKKAFGEPVFPNIIPDINFFQNHPSSFPEGGRFFLEKRYFFSITRRPVLVNMHEQIAASSGYWRTKGRTKEIVISGNDQLIGIKNMFVFWEGRDTIQTKTNWVMHEFRLTHRTTPNQLQVADWAVYRLFQEKNKRAEGSDEESSRRNDTDTP* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1075 181 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 11 166 - -
Lan15g1075 181 Pfam No apical meristem (NAM) protein 12 138 IPR003441 GO:0003677|GO:0006355
Lan15g1075 181 ProSiteProfiles NAC domain profile. 11 160 IPR003441 GO:0003677|GO:0006355
Lan15g1075 181 MobiDBLite consensus disorder prediction 162 181 - -
Lan15g1075 181 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 11 166 - -
Lan15g1075 181 Gene3D NAC domain 20 165 IPR036093 GO:0003677|GO:0006355
Lan15g1075 181 SUPERFAMILY NAC domain 8 160 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1075 Lan-Chr15 19750968 19767628 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1075 10 160 NAC Transcription Factor Family AT2G24430 34.437 4.33e-29 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan15g1075 NAM 2.4e-22 No_clan