Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1069 ATGGCTTCCAAGCTCTGCGACTCTTGCAAATCCACCACCGCCACCCTCTACTGCCGACCTGACTCCGCCTTCCTCTGCGCCGCCTGCGACTCCAATGTCCACGCCGCTAACAAACTCGCCTCCCGCCATCCACGTGTCACTCTCTGCGATGTTTGTGAACAAGCTCCTGCTCACGTTACATGCAAGGCTGATGCTGCTTCTCTCTGCTTCGCTTGCGACCGCGACATCCACACCGCTAATCCACTCGCTGCTCGCCATGAGCGCGTACCTGTCACGCCCTTCTATGACCAATCCATTCACTCCGTTAAATCTCACTTCGATGATTTCCCCGACGATGATCACCGTTTCTTCGCTAATGATGCTAATGCTGACGTCAGCACCGACGAGGCTGAGGCTGCTTCGTGGTTGCTTCCTAACCCGAAAGGCGCAGATCTGAACTCGTATGCTGAAATTGAACCGATTCCTTACGTAGATCTGGATTACGATCTGAAACCGCAGCAGCAGAAAAGTTCAAGTGTCACGGATGGTGTTGTTCCCGTACAGAACAACGAGCCTTTCAGCTACTCTTACAAGTTCCACAGCTCACAGTCACAGTCTCCGATGAGTCATAGTGTATCGTCATCGTCGATAGAGGTAGGGGTGGTGCCGGATGAGAATCCGATGACGGAGATATACAGCAAGGTGGCGGTGGCGGAGGGAGGGAATCGCAGTGTGGGAGTGGCGGCGGATAGAGAAGCTAGGGTTATGAGGTACAGGGAGAAGAGGAAGAATAGAAAGTTCGAGAAAACTATTCGCTACGCTTCAAGGAAAGCGTATGCAGAAACTAGGCCAAGGATCAAAGGAAGGTTTGCGAAACGTTCCGATGCTGATTCTCACCCAGTTGACGGATACGGTGTCGTTCCGACCTGTTAA 912 0.5274 MASKLCDSCKSTTATLYCRPDSAFLCAACDSNVHAANKLASRHPRVTLCDVCEQAPAHVTCKADAASLCFACDRDIHTANPLAARHERVPVTPFYDQSIHSVKSHFDDFPDDDHRFFANDANADVSTDEAEAASWLLPNPKGADLNSYAEIEPIPYVDLDYDLKPQQQKSSSVTDGVVPVQNNEPFSYSYKFHSSQSQSPMSHSVSSSSIEVGVVPDENPMTEIYSKVAVAEGGNRSVGVAADREARVMRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRSDADSHPVDGYGVVPTC* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1069 303 MobiDBLite consensus disorder prediction 284 303 - -
Lan15g1069 303 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 5 2 301 - -
Lan15g1069 303 SMART bboxneu5 49 91 IPR000315 GO:0008270
Lan15g1069 303 SMART bboxneu5 1 48 IPR000315 GO:0008270
Lan15g1069 303 Pfam B-box zinc finger 4 47 IPR000315 GO:0008270
Lan15g1069 303 Pfam B-box zinc finger 46 91 IPR000315 GO:0008270
Lan15g1069 303 ProSiteProfiles Zinc finger B-box type profile. 1 48 IPR000315 GO:0008270
Lan15g1069 303 CDD Bbox1_BBX-like 5 48 - -
Lan15g1069 303 ProSiteProfiles CCT domain profile. 244 286 IPR010402 GO:0005515
Lan15g1069 303 ProSiteProfiles Zinc finger B-box type profile. 44 91 IPR000315 GO:0008270
Lan15g1069 303 Pfam CCT motif 244 286 IPR010402 GO:0005515
Lan15g1069 303 CDD Bbox1_BBX-like 48 91 - -
Lan15g1069 303 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 2 301 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1069 Lan-Chr15 19708221 19709634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1069 1 302 C2C2-CO-like Transcription Factor Family AT5G24930 50.000 1.20e-97 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Lan15g1069 zf-B_box 4.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1069 - - gmx:100794431 407.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1069 15 19708221 19709634 Lan3g1121 3 23542384 23543715 LSH