Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1068 ATGGGTTATCTCAATTCAGTTTTGTCCTCTTCAAGCCAGGTTCATGCTGCTGATGATGGACCTGTCACTGGTGGGGGTCTCAGCCAGAATGGCAAATTCAGCTATGGGTATGCTAGCTCTCCTGGCAGGAGATCTTCAATGGAAGACTTTTATGAGACAAGAATTGATGGTGTTGATGGTGAAATCGTTGGCCTTTTTGGAGTTTTTGATGGTCATGGTGGTGTTCGTGCTGCTGAGTATGTCAAGCAAAACCTGTTTAGCAATTTGATTAGTCACCCAAAATTCATTTCTGACACCAAATCAGCAATATCCGATGCATATAACCATACCGACTCCGAGTTTCTGAAATCAGAACATAGTCATAACAGAGATGCTGGGTCAACTGCTTCCACTGCCATTCTAGTTGGTGACCGCTTGCTTGTAGCAAATGTTGGGGACTCCAGAGCTGTTATATGCAGGGGTGGTAATGCCATTGCTGTTTCTCGAGATCACAAACCAGACCAAACTGATGAAAGACAAAGGATTGAAGATGCAGGGGGCTTTGTCATGTGGGCTGGAACTTGGAGAGTTGGCGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTCCTGAAGCAGTATGTTGTTGCTGATCCTGAAATCCAGGAGGAAAAGGTTGACAGCTCTCTCGAGTTTCTTATATTGGCCAGTGATGGGCTATGGGATGTTGTCTCAAATGAGGAAGCTGTTGCTATGGTAAAACCTATCGAGGATGCCGAGGAGGCAGCAAAGATGCTAATGTTAGAAGCATCTAAAAGAGGCAGTGCTGACAATATCACTTGTGTTGTTGTTCGTTTCCTGGCGAACCAAGGCGCTTCTTCTCATGGTAACTCTGGCTAA 882 0.4535 MGYLNSVLSSSSQVHAADDGPVTGGGLSQNGKFSYGYASSPGRRSSMEDFYETRIDGVDGEIVGLFGVFDGHGGVRAAEYVKQNLFSNLISHPKFISDTKSAISDAYNHTDSEFLKSEHSHNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVAMVKPIEDAEEAAKMLMLEASKRGSADNITCVVVRFLANQGASSHGNSG* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1068 293 ProSitePatterns PPM-type phosphatase domain signature. 65 73 IPR000222 GO:0043169
Lan15g1068 293 SUPERFAMILY PP2C-like 28 280 IPR036457 -
Lan15g1068 293 SMART PP2C_4 24 278 IPR001932 -
Lan15g1068 293 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 3 289 - -
Lan15g1068 293 ProSiteProfiles PPM-type phosphatase domain profile. 34 280 IPR001932 -
Lan15g1068 293 SMART PP2C_SIG_2 29 280 IPR001932 -
Lan15g1068 293 Pfam Protein phosphatase 2C 61 273 IPR001932 -
Lan15g1068 293 Gene3D - 26 286 IPR036457 -
Lan15g1068 293 MobiDBLite consensus disorder prediction 1 27 - -
Lan15g1068 293 CDD PP2Cc 33 280 IPR001932 -
Lan15g1068 293 MobiDBLite consensus disorder prediction 1 17 - -
Lan15g1068 293 PANTHER ALPHABET, ISOFORM E-RELATED 3 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1068 Lan-Chr15 19701898 19706513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1068 1 284 PP2C-type Phosphatase Gene Family AT4G31750 90.845 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1068 K17506 - gmx:547661 539.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1068 15 19701898 19706513 Lan14g0834 14 15110920 15115769 LSH
Lan15g1068 15 19701898 19706513 Lan3g1120 3 23535384 23539958 LSH