Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1063 ATGGCTGCTTATTCGAGATCTGTCTCTACTTCTGTTTTGTTCTTTTTCCTTCTCTTAGGCTTCTCTGCAGCTAAGCAAGTATTAGTCGGAGGGAAGATAGATGCATGGAAGGTTCCTTCTTCTGAAGCTGATTCCCTCAACAAATGGTCTCAAAAGGCTCGTTTCCAAGTTGATGATTATCTTGTGTGGAAATATGATGGTGGGAAAGACTCAGTGTTGCAAGTTCAGAAGGAAGATTATGCTAATTGCAACACATCAAAGCCTATCAATGAATACAATGATGGAAACACAAAGGTGAAGCTTAACAGACCTGGGCCATTCTACTTCATAAGTGGAGCAAAGGGTCACTGTGAGAATGGTGAGAAGATAGTTGTGGTGGTCATATCTCCAAAGAGGAACAGATACATTGGAATTTCTCCTTCACCTTCTCCATCACAATCATTGGAAGCTCCAGCTATTGCCCCTACAAGCAGTGCCACTGCTCTGAAAAGTGGCCTTGTGGTGATGGGTATGGGTGTATTGGCTATGTATGTGGGTTTTCTCATTTGA 549 0.4262 MAAYSRSVSTSVLFFFLLLGFSAAKQVLVGGKIDAWKVPSSEADSLNKWSQKARFQVDDYLVWKYDGGKDSVLQVQKEDYANCNTSKPINEYNDGNTKVKLNRPGPFYFISGAKGHCENGEKIVVVVISPKRNRYIGISPSPSPSQSLEAPAIAPTSSATALKSGLVVMGMGVLAMYVGFLI* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1063 182 SUPERFAMILY Cupredoxins 24 128 IPR008972 -
Lan15g1063 182 Gene3D - 23 131 IPR008972 -
Lan15g1063 182 ProSiteProfiles Phytocyanin domain profile. 25 129 IPR003245 GO:0009055
Lan15g1063 182 PANTHER BLUE COPPER PROTEIN 8 175 IPR039391 GO:0009055
Lan15g1063 182 Pfam Plastocyanin-like domain 36 120 IPR003245 GO:0009055
Lan15g1063 182 PANTHER EARLY NODULIN-LIKE PROTEIN 3 8 175 - -
Lan15g1063 182 CDD OsENODL1_like 25 128 IPR041846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1063 Lan-Chr15 19675368 19676251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1063 24 181 Phytocyanin Superfamily AT4G31840 50.633 1.11e-54 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1063 - - gmx:100527857 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1793 6 29276525 29277330 Lan15g1063 15 19675368 19676251 PCT
Lan15g1063 15 19675368 19676251 Lan6g1793 6 29276525 29277330 PCT