Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1059 ATGGAAGAAATACACTGTCACAATTTGTTTGGCAAATATGAAATGGGTAGGCTTCTAGGGAAGGGGACCTTCGCTAAAGTATACTACGCCAAACAAATAGCCACGGGTGAAAGCGTAGCAGTCAAAGTTATCAACAAAGACCAAGTGAAAAAACAGGGCATGATGGAGCAGATCACAAGAGAGATTTCAGTTATGCGTTTGGTTAGACACCCAAACGTTGTTGAACTGAAAGAAGTATTAGCGACGAAAAAGAAAATCTACTTCGTGATGGAATATGTTCGTGGCGGAGAGCTTTTCGCAAAGGTCGCAAAAGGAAAGCTGAAAGAAGATCAAGCCCGTAAATACTTTCAGCAATTAATCTCAGCCGTTGATTTCTGTCACAGCAGAGGCGTTTCCCACCGTGACTTAAAGCCTGAAAACCTTCTCCTCGACCATAACGAGAACCTTAAAATCTCCGATTTCGGACTCTCCGCCCTGCCGGAGCAGTTACGCTTTGACGGACTCTTACACACGCAGTGTGGGACCCCTGCTTACGTGGCACCTGAGGTTTTACGAAAGAAAGGTTACGATGGATCTAAAGCTGATATATGGTCTTGTGGAATCATATTATATGTTTTGCTTGCAGGGTTTCTTCCTTTTCAACATGAGAATCTTATGTCCATGTATAGCATGGTTTTAAGAGCACAGTTTCAGTTTCCTCCTTGGTTTTCATCTGATTCAAGAAAATTGATCTCTAATATTCTAGTTGCGGATCCTTCTAAACGAACCACAATTCCCGCTATTATGCGCGTGCCATGGTTCCGCAAGGGATTTGAATTCCTAGTCATTAAGGTTGATGAAGAAGAAGAAGAAGAAGTTAAAGAAGCAGACGGTTCTAGAAAGAGTCATAAGATGTCATCACCAAAGTTTTTTAACGCGTTTGAGTTCATATCTTCGATGTCTTCGGGTTTCGATCTTTCTGGATTGTTCGAGAGCAAGAAGAAAAAAGGTTCGGTGTTCACATCCAAGTGTTCAGCAACGGCGATCGTGGACAAGATTGAAACCGCGGCGGAGGGGTTGAGTTTCAAGGTGACAGGTGTAAAGGATTTCACTATTAGGATGCAGGGGCCGCCGGAGGGGAGGAAAGGGAGACTTTCCGTGACGGCGGAGGTGTTTGAGGTGGCGCCGGAGGTGGCGGTGGTGGAGTTTTCGAAGTCCGCCGGAGACACGTTGGAGTATGCTAAGTTTTATGAGGAGGATATGAGACCAGCGTTGAAAGATATTGTTTGGTCGTGGCAAGGTGATGCCACGTGTAACCCTAACATCACAGGGTCTCAAATTGAAGAAAGTCAAAACCAGGTTATTACAAATTAA 1353 0.4442 MEEIHCHNLFGKYEMGRLLGKGTFAKVYYAKQIATGESVAVKVINKDQVKKQGMMEQITREISVMRLVRHPNVVELKEVLATKKKIYFVMEYVRGGELFAKVAKGKLKEDQARKYFQQLISAVDFCHSRGVSHRDLKPENLLLDHNENLKISDFGLSALPEQLRFDGLLHTQCGTPAYVAPEVLRKKGYDGSKADIWSCGIILYVLLAGFLPFQHENLMSMYSMVLRAQFQFPPWFSSDSRKLISNILVADPSKRTTIPAIMRVPWFRKGFEFLVIKVDEEEEEEVKEADGSRKSHKMSSPKFFNAFEFISSMSSGFDLSGLFESKKKKGSVFTSKCSATAIVDKIETAAEGLSFKVTGVKDFTIRMQGPPEGRKGRLSVTAEVFEVAPEVAVVEFSKSAGDTLEYAKFYEEDMRPALKDIVWSWQGDATCNPNITGSQIEESQNQVITN* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1059 450 CDD STKc_SnRK3 12 266 - -
Lan15g1059 450 ProSiteProfiles NAF domain profile. 299 324 IPR018451 GO:0007165
Lan15g1059 450 Gene3D Transferase(Phosphotransferase) domain 1 93 272 - -
Lan15g1059 450 Gene3D Phosphorylase Kinase; domain 1 4 92 - -
Lan15g1059 450 SUPERFAMILY Protein kinase-like (PK-like) 10 277 IPR011009 -
Lan15g1059 450 PANTHER - 1 435 - -
Lan15g1059 450 SMART serkin_6 13 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g1059 450 Pfam NAF domain 301 358 IPR004041 GO:0007165
Lan15g1059 450 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 25-RELATED 1 435 - -
Lan15g1059 450 CDD CIPK_C 305 419 - -
Lan15g1059 450 Pfam Protein kinase domain 13 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g1059 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Lan15g1059 450 Gene3D Kinase associated domain 1, KA1 299 424 - -
Lan15g1059 450 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Lan15g1059 450 ProSiteProfiles Protein kinase domain profile. 13 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1059 Lan-Chr15 19642902 19644610 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1059 2 439 CBL-interacting serine-threonine protein kinases AT5G25110 68.539 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lan15g1059 Pkinase 2.7e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1059 - - gmx:100817520 686.026