Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1054 ATGATAATAATAGGAATAAAATGGGTGTTATATATACTCTCTTTTATCCATTTAAAGGTATATATGTACATGTTAAAATTTCTTAACCTACCACCAAGTGGACCTAGAATTGAAAAATACTCTACAATGGAAACACTCATGAGTCAGGAGCCTTATCTCTGTGATAACACTACAGAGCTTCCTCCAATAGAGACAGATACCTTATTGGATCTGAATGTTCCTTGTGATGATTCTTCTCTTGAATGCAGTCCAAAGCTAAATCTCATTACATGTTTGGATATGGATTCAGCTAACACTTCATCAGAAGAAAACCCTCCTGATCCTGAAGGTTTTGATGCAGCAGCAGAGCCCAGAGTATTCTCATGTAACTACTGCAAGAGAAAGTTCTATAGTTCTCAAGCTCTTGGAGGACACCAAAATGCTCATAAAAGAGAGAGATCAATAGCAAAGAGAGGTCAAAAATTAAGAACACATATAATGGCCTCAGCAGCAGCTTTTGGAATACCTTTTCTTCAAGGTATAGCATCTCTACCACTCCATGGTAATAGACCACTTGGAATTCAAGCTCACTCCATGGTTCATAACCCTTCTCAATATTTTTCATCTCATATTGCTGGGTATGGAAGCAATTATGGACAACATAGTTGGTCAAGATCAAGACCTGTTTTTTATCAACAACCTGGAATAGGGAAGCTAGCAATGGAAACTTCACATAAAACAGCATTATCATCAAGAGGGAGCAGTGTTGGTAGATTTGAAGCTGTTAATGTAAGAAGTTCTATGCTCAATTCTGCAGTCAATGAAGAAACAAGTGGATATGTTTTTAGTGGAACTCCTATGAAGAGTAATCAAGATGATATGAAGCTTCTTGATTTATCATTAAAGCTCTAA 891 0.367 MIIIGIKWVLYILSFIHLKVYMYMLKFLNLPPSGPRIEKYSTMETLMSQEPYLCDNTTELPPIETDTLLDLNVPCDDSSLECSPKLNLITCLDMDSANTSSEENPPDPEGFDAAAEPRVFSCNYCKRKFYSSQALGGHQNAHKRERSIAKRGQKLRTHIMASAAAFGIPFLQGIASLPLHGNRPLGIQAHSMVHNPSQYFSSHIAGYGSNYGQHSWSRSRPVFYQQPGIGKLAMETSHKTALSSRGSSVGRFEAVNVRSSMLNSAVNEETSGYVFSGTPMKSNQDDMKLLDLSLKL* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1054 296 ProSitePatterns Zinc finger C2H2 type domain signature. 122 142 IPR013087 -
Lan15g1054 296 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 64 296 - -
Lan15g1054 296 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 64 296 IPR044246 GO:0009788
Lan15g1054 296 SUPERFAMILY beta-beta-alpha zinc fingers 117 147 IPR036236 -
Lan15g1054 296 Gene3D Classic Zinc Finger 113 166 - -
Lan15g1054 296 ProSiteProfiles Zinc finger C2H2 type domain profile. 120 147 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1054 Lan-Chr15 19568309 19569819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1054 37 296 C2H2 Transcription Factor Family AT5G10970 39.483 8.65e-44 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lan15g1054 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1054 - - lang:109327413 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1054 15 19568309 19569819 Lan14g0825 14 15044137 15045231 LSH
Lan15g1054 15 19568309 19569819 Lan3g1102 3 23366425 23367582 LSH
Lan3g1720 3 29720609 29721349 Lan15g1054 15 19568309 19569819 PCT
Lan15g1054 15 19568309 19569819 Lan3g1720 3 29720609 29721349 PCT