Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1040 ATGTTCGCTGCAGAGAATGGCTTAAAGGGTGACCCAAGGCTTGAATCTATTTCTCAAGCAATAAGAGTTGTCCCTCACTTCCCTAAACAAGGTATAATGTTTCAAGACATAACTACATTGTTGTTGGATCACAAGGCGTTCAAAGACACGATCGATATATTTGTCGAACGTTATAGAGACATGCATATTTCCGTTGTTGCCGGAAATGAAGCGAGGGGATTCTTGTTTGGTCCCTCAATTGCATTGAGAATTGGTGCAAAGTTTGTTCCTCTACGCAAACCTCGCAAGCTGCCAGGTGAGGTAATTTCAGAAAAATATGATCTAGAATATGGAACTGATTGTTTGGAGCTTCATGTTGGCGCTGTGCAGCCCGGTGAGCGAGCCATAGTCATTGATGATTTGGTAGCTACAGGTGGAACTCTGAAAGCAGCTATAAAACTTCTAGAACGTGTTGGGGCTGAAGTGGTGGAATGTGCTTGTGTGATTGGTGTACCTGATGTTAAGGGACAGTGCAGTCCTATCGGAAAACCGCTTTATGTACTTATTGAGCCCCGCTGA 558 0.4391 MFAAENGLKGDPRLESISQAIRVVPHFPKQGIMFQDITTLLLDHKAFKDTIDIFVERYRDMHISVVAGNEARGFLFGPSIALRIGAKFVPLRKPRKLPGEVISEKYDLEYGTDCLELHVGAVQPGERAIVIDDLVATGGTLKAAIKLLERVGAEVVECACVIGVPDVKGQCSPIGKPLYVLIEPR* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1040 185 SUPERFAMILY PRTase-like 18 168 IPR029057 -
Lan15g1040 185 Hamap Adenine phosphoribosyltransferase [apt]. 17 184 IPR005764 GO:0003999|GO:0005737|GO:0006168
Lan15g1040 185 TIGRFAM apt: adenine phosphoribosyltransferase 18 171 IPR005764 GO:0003999|GO:0005737|GO:0006168
Lan15g1040 185 Pfam Phosphoribosyl transferase domain 42 165 IPR000836 -
Lan15g1040 185 CDD PRTases_typeI 51 183 IPR000836 -
Lan15g1040 185 Gene3D - 5 183 IPR029057 -
Lan15g1040 185 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 5-LIKE ISOFORM X1 1 185 - -
Lan15g1040 185 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 1 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1040 Lan-Chr15 19445286 19448199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1040 11 183 PRT Gene Family AT1G27450 69.942 5.56e-87 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1040 K00759 - gmx:100499904 341.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1040 15 19445286 19448199 Lan3g1087 3 23251563 23255337 LSH
Lan3g1087 3 23251563 23255337 Lan15g1040 15 19445286 19448199 PCT
Lan15g1040 15 19445286 19448199 Lan3g1087 3 23251563 23255337 PCT