Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1038 ATGGATAAACAAGTTATTGCTACTCTATCAGCTTCTTCTTTTGATTATGTACTCTTGGATGGTGACGTTGAACATCCCAAAACTGTCAAAGCCTCGTCCAGCAACACCGATCCGTGGATTAAACCAGAAATGTTGAAACTCAGACACAGAATCGGGCGAGGGGCCTTTGGTGATGTTTGGTTAGCAACTCATCATCAGTCAACTGAAGATTACGATGAGTATCATGAAGTTGCTGTCAAGATGTTACCTCTACTAAGAGAGGATCAAATGAAGACTGTATTAGAGAAATGTCATGAACTGTATTTTCAGTTGCAAGGGGTGGCTAGGGCTTGCGGGCTACATGGAATTTCAATTATAAATGGAAGGATATGCATCGTTATGAGTTTTTACGAAGGTTCAATTGGTGACAAGATGGCAAGACTCAGAGACGGAAGGATTTCATTGCTTGATGTTTTGAGGTATGGTATCAATCTGGCTCAAGGTATTCAGGAACTTCACTCAAAAGGGATCCTAATTCTCAATCTCAAGCCATCTAATGTGCTTCTCACCGATAGTGATCAAGCAATATTGGGAGATTTTGGTATTCCTAATATTTTGTTAGGTTCCGCATTCGTAAGCTCAGATATGCCGAACAGGCTTGGGACTCCAAATTACATGGCCCCAGAACAATGGCAACCAGAAGTTAGAGGCCCTATTTCCTTTGAAACAGATTCGTGGGGGTTCGGGTGCACTATTGTGGAAATGTTGACTGGTGTTCAACCTTGGTATGGGCATCCTGTTCGTGAAATGTATCAATCTGTTGTTGAAAAGCATGAAAAAGCCCATATTCCAAGTGGTCTTCCTTCTTCGATTGAGAATATCCTCAGTGGATGCTTGGAATATGATTTAAGAAACCGTCCTTTAATGGTGGATATTCTTACTGTCTTTAAAAGCTCACTGAATGCACTAGGCGATGATGGAGGATGGAGATATATTGGAACTAATACAGTTACTGTAAAATCAAGTAGCACTGGCTATACAGGGTGGTTCCTCTCAAAGGATCATCTTAAGGTGGGTGACACGGTGCGGTCTAGGAAGCCTTCCAATTCATGCAGACCTCAAAACATGGATGTCCCAGAAGGAATTGTTGTTGGATTAGATCGTAATGCAGATTATGGTTTCATTTTAGTGAGGGTCCATGGTGTCCATGACCCTATAAGGATTCACGCATCAACTCTTGAACGTGTCACCAATGGTTTGGCAGCCGGTGATTGGGTATGCTTGAAGGAAGAAAATGAGAATCACTCACCAGTCGGTATTCTTCATTCCATCAATCGTGACGGGAGAGTAACCGTTGGATTTATTGGGCTGCAAACTTTTTGGAAAGGAAATTCTTCAGAACTTGAAATGGCAGAATCTTACTGTGTTGGCCAGTTTGTTAAGCTGAAAGCCAATGTTTTGAGTCCTCGATTTGAATGGCCTCGTAAAAGAGGAGGGGCCTGGGCTGCTGGTAGGATTTCATGGATCCTACCAAATGGGTGTCTAGTTGTCAAGTTTCCAGGGTTGTTGACTTTCAGAGACGAGCCAAACATCTTCTTGGCCGATCCCTCCGAGGTTTATGCAGTTAGTTTTAGGACTTGTCCAAAGATGACACAAAAGTATCAACATATAGAGGATCATCACTGGACAGTTAGACCTGTTCTAATTGCATTTGGCCTTCTTACAGCTATGAAACTTGGGATGCTAATAGGAAGGAAAATGGGTAGGAAAATGAGTCCTATTGCAATAGACAATGAAAGTCAACATGAAGATGGCAAGAGTGTTGGTAACCCTACATGGACATCTTCAGTAGCTAACATCCTTTTCAGAGAAGGTGTTAAGTTGCCCACTGGCCAGTAA 1878 0.4233 MDKQVIATLSASSFDYVLLDGDVEHPKTVKASSSNTDPWIKPEMLKLRHRIGRGAFGDVWLATHHQSTEDYDEYHEVAVKMLPLLREDQMKTVLEKCHELYFQLQGVARACGLHGISIINGRICIVMSFYEGSIGDKMARLRDGRISLLDVLRYGINLAQGIQELHSKGILILNLKPSNVLLTDSDQAILGDFGIPNILLGSAFVSSDMPNRLGTPNYMAPEQWQPEVRGPISFETDSWGFGCTIVEMLTGVQPWYGHPVREMYQSVVEKHEKAHIPSGLPSSIENILSGCLEYDLRNRPLMVDILTVFKSSLNALGDDGGWRYIGTNTVTVKSSSTGYTGWFLSKDHLKVGDTVRSRKPSNSCRPQNMDVPEGIVVGLDRNADYGFILVRVHGVHDPIRIHASTLERVTNGLAAGDWVCLKEENENHSPVGILHSINRDGRVTVGFIGLQTFWKGNSSELEMAESYCVGQFVKLKANVLSPRFEWPRKRGGAWAAGRISWILPNGCLVVKFPGLLTFRDEPNIFLADPSEVYAVSFRTCPKMTQKYQHIEDHHWTVRPVLIAFGLLTAMKLGMLIGRKMGRKMSPIAIDNESQHEDGKSVGNPTWTSSVANILFREGVKLPTGQ* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1038 625 PANTHER OS06G0639500 PROTEIN 1 620 - -
Lan15g1038 625 ProSitePatterns Protein kinases ATP-binding region signature. 51 80 IPR017441 GO:0005524
Lan15g1038 625 Gene3D Phosphorylase Kinase; domain 1 26 129 - -
Lan15g1038 625 Pfam Protein tyrosine and serine/threonine kinase 45 307 IPR001245 GO:0004672|GO:0006468
Lan15g1038 625 PANTHER OS06G0639500 PROTEIN 1 620 - -
Lan15g1038 625 CDD STKc_PknB_like 46 300 - -
Lan15g1038 625 ProSiteProfiles Protein kinase domain profile. 45 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g1038 625 Gene3D Transferase(Phosphotransferase) domain 1 131 319 - -
Lan15g1038 625 SUPERFAMILY Protein kinase-like (PK-like) 46 307 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1038 Lan-Chr15 19437011 19441352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1038 48 299 MAP Kinase Kinase Kinase AT2G32510 29.070 7.56e-21 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Lan15g1038 PK_Tyr_Ser-Thr 4.1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1038 - - gmx:100789574 980.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1778 6 29086529 29092469 Lan15g1038 15 19437011 19441352 PCT
Lan15g1038 15 19437011 19441352 Lan6g1778 6 29086529 29092469 PCT