Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1034 ATGGGAAAGTACTGGTCTTTCATCAATGTTTTGTGTACCCTTTTGTTGTGTGAAGTTTGTTTGGCTGGTGTTCAATTTATTGGTAAGGTCTCACCTGGTTTTCAAGCTGCTCAATTGAATTGGATTGACAATAATGGCATGTTCCTTATGTCAGACAGTGGTGGAAAATTTGCTTTTTGCTTTATCACAACTCCAAATGACATCACAAAGTTTCTACTAGGAGTTCTCCATGTGGCTACTTCCACTTTGGTTTGGTCTGCAAATAGAGCAAATCCTGTTTCTAATTCTGACAACTTTGTGTTCGATGACAAGGGCAATGTTTTTTTACAGAAAGATGGAACTGTGATCTGGTCTACAAATACAAGTGGCAAAGGAGTTTCTTCAATGGAATTGAAAGAAACTGGAAATTTGGTTTTGCTAGGGAATGATAATAGCACAATTATTTGGCAGAGTTTCAATCATCCAACAGATACTTTGTTGTCGAAACAAGACTTCACAGAAGGAATGAAACTTGTGAGTGAACCAAGCTCTAATAACTTGATCCATGTTCTTGAGATGAAATCTGGCATTGTGAATCTATATGCTGATTATCAAACTCCACAGACTTATTGGACTTCGCAGACGGATAACCGAAAAATAATCAACAAAGCTGGTAATGTGGTTGCTTCAGCAAGCCTTAGTGCAAATTCTTGGAGGTTCTATGATAAAAACAAGTCTTTGCTATGGCAATTCATTTTCTCTGATGATTTAGGTGCAAGTACTAATTCAACTTGGGTTGCAGTTTTGAAAAGTGATGGCTTTATCACTTTCTCTAATCTTGGAAGTGGAGGGTTTGATGGTGCTTCAACAACAACAATACCACAAGGTTCTTGTAGTACACCAGAACCTTGTGGTCCATATTACATATGCACAGGTTATGGAAAGTGTAGCTGCCCTTCTGTTCTTAACTCTGGTGGTCCCAATTGTACACCAGGGTTTGTCTCTCCTTGTGATATGAAAGAAAAATCCATTGATCTTATGAAAGTTGATGATGGACTCAATTACTTTGCACTTCAATTTCTTAAACCTTTCTCAATAACAGATTTGGCTGGTTGCCAAACTTCGTGCCGCGGAAATTGCTCATGCATTGCAATGTTCTTCCAGAAAAGTTCAGGGAACTGCTTCCTATTAAATAGTATAGGAAGCTTTGAGAATTCTAATACTGGTTCTGGCTTTGTTTCTTACATTAAGGTCTCAACTGATAGAGGAGTTGGCACAGGTGGCAGTGGTAGCAGCAATAAGCACACCATAGTTGTTGTCATCAGTATCTTGGTACCATTGCTTTTCATTTCCTGTCTTCTATTTTTGGGGCTTAGAGACCACAGGAAAAATAAAAAAATGCCCCAGTCTCCTAGAGATAATTCAGACGATGACAGTTTCTTGGAGAATTTAACCGGTATGCCGATTCGCTACAGCTACAAAGATCTTGAAACTGCAACTAATAACTTCTCAGTGAAGCTTGGGCAAGGGGGTTTTGGCTCAGTTTATAAAGGGGTTCTACCAGATGGAACTCAACTAGCCGTGAAGCAGTTAGAAGGTATTGGTCAAGGGAAGAAAGAGTTCAGGGCTGAAGTTACCATCATTGGGAGCATCCATCACCTCCATTTGGTAAGGCTTAGAGGATTTTGTGCCGAAGGAACTCATAGGCTTCTTGCTTATGATTTCATGGCTAATGGCTCGTTGGATAAATGGATATTCGGTAAAAACAATGGCCAATTTGTGTTGGATTGGGACACAAGGTTTAACATAGCTCTTGGAACAGCAAAAGGACTTGCTTATTTGCATGAAGATTGTGACTCGAAGATAGTTCATTGTGACATCAAGCCAGAAAATGTTCTTCTTGATGATCATTTCATGGCCAAGGTTTCAGATTTTGGTCTAGCCAAGCTCATGAACAGAGAACAAAGTCGTGTTTTCACAACACTAAGAGGCACTAGGGGGTACCTTGCACCAGAGTGGATAAAAAACTATGCAATATCAGAAAAAAGTGATGTCTATAGTTATGGTATGGTTTTATTAGAGATCATTGGAGGAAGGAAAAACTATGATCCTGCTGAGACTTCAGAGAAATCAAACTTCCCAACATATGCATTTAAGATGATGGAAGAAGGGAAGATTAGAGATATTGTTGATTCAAAGTTGTCGATTACAGGTCATGATGATAGAGTGCATACTGCTATCAAAGTTGCACTATGGTGCATACAAGAAAATATGTCTATGAGGCCTTCAATGACCAAAGTTGTGCAAATGCTAGATGGTCTTTGTACTGTTCCTAAGCCACCACATACTTCTTCTCTTCCATCAGATTGTAATATTGATTCATATCTCTCTGCAGATAGGCTTTCAGGTCCAAGATAA 2397 0.3913 MGKYWSFINVLCTLLLCEVCLAGVQFIGKVSPGFQAAQLNWIDNNGMFLMSDSGGKFAFCFITTPNDITKFLLGVLHVATSTLVWSANRANPVSNSDNFVFDDKGNVFLQKDGTVIWSTNTSGKGVSSMELKETGNLVLLGNDNSTIIWQSFNHPTDTLLSKQDFTEGMKLVSEPSSNNLIHVLEMKSGIVNLYADYQTPQTYWTSQTDNRKIINKAGNVVASASLSANSWRFYDKNKSLLWQFIFSDDLGASTNSTWVAVLKSDGFITFSNLGSGGFDGASTTTIPQGSCSTPEPCGPYYICTGYGKCSCPSVLNSGGPNCTPGFVSPCDMKEKSIDLMKVDDGLNYFALQFLKPFSITDLAGCQTSCRGNCSCIAMFFQKSSGNCFLLNSIGSFENSNTGSGFVSYIKVSTDRGVGTGGSGSSNKHTIVVVISILVPLLFISCLLFLGLRDHRKNKKMPQSPRDNSDDDSFLENLTGMPIRYSYKDLETATNNFSVKLGQGGFGSVYKGVLPDGTQLAVKQLEGIGQGKKEFRAEVTIIGSIHHLHLVRLRGFCAEGTHRLLAYDFMANGSLDKWIFGKNNGQFVLDWDTRFNIALGTAKGLAYLHEDCDSKIVHCDIKPENVLLDDHFMAKVSDFGLAKLMNREQSRVFTTLRGTRGYLAPEWIKNYAISEKSDVYSYGMVLLEIIGGRKNYDPAETSEKSNFPTYAFKMMEEGKIRDIVDSKLSITGHDDRVHTAIKVALWCIQENMSMRPSMTKVVQMLDGLCTVPKPPHTSSLPSDCNIDSYLSADRLSGPR* 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1034 798 SMART serkin_6 494 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g1034 798 Pfam D-mannose binding lectin 82 165 IPR001480 -
Lan15g1034 798 CDD B_lectin 42 155 IPR001480 -
Lan15g1034 798 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 210 IPR036426 -
Lan15g1034 798 Gene3D Phosphorylase Kinase; domain 1 458 568 - -
Lan15g1034 798 ProSiteProfiles Protein kinase domain profile. 494 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g1034 798 ProSiteProfiles Bulb-type lectin domain profile. 34 152 IPR001480 -
Lan15g1034 798 CDD STKc_IRAK 500 767 - -
Lan15g1034 798 PIRSF SRK 5 794 IPR024171 GO:0004674
Lan15g1034 798 Pfam Protein kinase domain 498 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g1034 798 SUPERFAMILY Protein kinase-like (PK-like) 473 764 IPR011009 -
Lan15g1034 798 SMART blect_4 40 155 IPR001480 -
Lan15g1034 798 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Lan15g1034 798 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 10 782 - -
Lan15g1034 798 Gene3D Transferase(Phosphotransferase) domain 1 569 773 - -
Lan15g1034 798 ProSitePatterns Protein kinases ATP-binding region signature. 500 522 IPR017441 GO:0005524
Lan15g1034 798 Gene3D - 43 154 IPR036426 -
Lan15g1034 798 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 10 782 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1034 Lan-Chr15 19419866 19422354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1034 440 774 Receptor kinase-like Gene Family AT5G20050 45.915 2.23e-97 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lan15g1034 Pkinase 2.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1034 - - gmx:100791158 1196.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1034 15 19419866 19422354 Lan3g1078 3 23091752 23094704 LSH
Lan3g1078 3 23091752 23094704 Lan15g1034 15 19419866 19422354 PCT
Lan15g1034 15 19419866 19422354 Lan3g1078 3 23091752 23094704 PCT