Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1027 ATGGTGCTATCCTTCGCTAGAATAATCATGAGGCTTTTTCCCCTCCCAATCTTCTTATGCATATTGCTCAAACAAATGAGCCTAGTTCTTGGAGATGTTGGAACAGCTTCTTCATATGGACCTCCATATATACCTACTGTTTGTGATGGGAATAGGGCAGAACAGTTTCCACCAGGGAATATGTTTGTGGCAGTGAATGAAGGGTTGTGGGATAACGGAGCAGCATGTGGAAGGAGATACAGAATAAGGTGTGTGAGTGGAAATAAGAGACCATGCAAAGGTGGTAGCATTGTTGTTAAAGTCGTTGATTTTTGTCCTAGGTCACCATGTCCCAACACATTCCTTATGTCTCATGATGCTTTTGAAGCCATCTCACGATTCCATAATGCTAAAATCATTGTTGAATATACACAGATATAA 420 0.4095 MVLSFARIIMRLFPLPIFLCILLKQMSLVLGDVGTASSYGPPYIPTVCDGNRAEQFPPGNMFVAVNEGLWDNGAACGRRYRIRCVSGNKRPCKGGSIVVKVVDFCPRSPCPNTFLMSHDAFEAISRFHNAKIIVEYTQI* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1027 139 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 34 139 IPR007112 -
Lan15g1027 139 Gene3D - 32 139 IPR036908 -
Lan15g1027 139 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 10 138 - -
Lan15g1027 139 Pfam Lytic transglycolase 64 136 IPR009009 -
Lan15g1027 139 SUPERFAMILY Barwin-like endoglucanases 21 138 IPR036908 -
Lan15g1027 139 PANTHER RLPA-LIKE PROTEIN, DOUBLE-PSI BETA-BARREL-RELATED 10 138 - -
Lan15g1027 139 SMART dpbb_1 63 136 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1027 Lan-Chr15 19375456 19376459 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1027 9 126 Expansin Gene Family AT2G45110 28.462 5.55e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1027 - - gmx:100792215 214.542