Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1016 ATGTCGAAACGTGGTGTAAAAAAATCACTTGCAACTTTATGTGGTACCTTCCATGAAGAAACAACACAAGAAGGTGACGACAAAGAAACAAATCGCATAGAATTGGATCAGATATCAAAGGATGAAGGTAGCCAATATAGTCTTACCGGCCTCCTTCTTCCTCCTCTTGGCGCCACCGCCGCCAGTAACCGGAGACATAAACTCCGATCCTTCATTATCTCCCCATATAACCCTCGCTATAGGTTATGGCAATCGTTCTTGGTGGTGTTGGTTTTCTACACTGCATGGGTGTGTCCGTTTGAATTTGGATTCCTTATTAAACCAAAGAATGCTCTTCAAGTAACAGATAATGTGGTCAATGCATTTTTTGCAATTGACATTGTTATCACCTTCTTTGTTGCCTATCTAGACAAGGCTACTTATCTGCTTGTTGATAAACCAAAACTCATTGCTTGGAGATATGCAAGAACATGGCTTGTTTTTGATGTCATATCTACAATCCCTTCCGAATTTGCCCCCGATATATTGCCCGAATCTCTTGAGACTTATGGCTACTTCAACATTTTTCGTCTTTGGCGTATTCGCAGAGTTAGTGCCATGTTTGAAAGATTAGAAAAGGACAGGCATTATAGCTACTTCTGGGTTCGCTGTTCAAAACTTATATGTGTTACTCTATTTACAACCCACTTTGCTGCTTGCCTTTTCTATTTTATTGCTATACATAAAGAACAGAAAAGTACATGGCTGAGCATAGTTGCTGATACTGCTGATGACTCTCTTTGGGGTCACTATATAACATCGATGTACTGGTCGATATCGACCTTATCAACAGTTGGTTATGGTGATCTGCATCCAGTAAATACAAAGGAAATGGTGTTTGACATATTCTTTATGCTCTTTAACCTGGGGCTAACATCATATATTATAGGAAACATGACAAACTTGGTTGTCCAATTGACCAGCAGAACTAGGAAATATAGAGATACTGTGCATGCTGCTTTAGGTTTTGCCCAACGGAATCAATTATCTAACCGGTTGCAAGAACAGATGCTTGCACATTTGTTTATGAAGTACAGAACAGACTCAGAAGGATTGCAGCAGCAGGAGATTGTTGATACTCTTCCAAAAGCTATTCGATCTAGCGTAGCGCAATATCTATTTGATACACATGTGAAGAATGTGTACTTGTTTCATGGAGTGTCAGAGGACCTACGTTTTCAACTGGTCACGGAGATGAAGGCCGAGTATTTTCCTCCGAGGGAAGATGTGATTTTGCATAATGAAGCACCAACAGACTTGTATATTTTGGTCACAGGTGCAGCAGAAATTATAAGGCACAATAATGGAATGGAACAGATCATTGGTGAGGCACATTCAAGTGATGTACTTGGAGAAATAGGAGTTCTGTGTTACAGGCCACAACTGTTTACAGTTCGAACCAAACGATTGACACAACTTCTGCGCTTGAACCGTACCACATTTCTAAATCTTGCTCAATCAAATGTTGGAGATGGGACAATAATCATGAACAATTTTCTACATCATTTGCGAGAATCAAAGTTTCCAGGGATGGAAATCATTATGGCCGAAACAGAGGCCATGCTGGCTCGGGGGAAAATGGAACTGCCCCTTAGCACATGTTTTGCTGCAGAAAGAAATGATGATGTATTGTTACAGAGGTTGCTGAAGAAGGGTTCAAATCCAAATGAAGTAGATAAGGAAGGAAAGACAGCACTGCATCATGCAGCTTCTAAAGGCAATGAGCATTGTGTAGTTCTGCTTCTAGAATATGGTGCTGATCCCAATATAAAAGGTAAAGGAGCTAGCATGGCAGCTGAAAACAGTAACACTAGTACGAGGGACATGCATGAAGTAGTAGCACCCAGAGTGATACTTAGTTGTCCTGAAAAAGGAGCACATGCTGGAAAGCTTGTTTTGTTGCCCAAGTCACTCCAAGAACTGCTAGATATTGGTGCAAGAAAGTTTGATTTCTCTCCCACCAAAGTTTTGACCAAAGAAGGAGCTGAAATTGATGACATAAATCTTATTAGAGATGGTGATCATCTTTTTGTTGCACAGGACTGA 2085 0.4058 MSKRGVKKSLATLCGTFHEETTQEGDDKETNRIELDQISKDEGSQYSLTGLLLPPLGATAASNRRHKLRSFIISPYNPRYRLWQSFLVVLVFYTAWVCPFEFGFLIKPKNALQVTDNVVNAFFAIDIVITFFVAYLDKATYLLVDKPKLIAWRYARTWLVFDVISTIPSEFAPDILPESLETYGYFNIFRLWRIRRVSAMFERLEKDRHYSYFWVRCSKLICVTLFTTHFAACLFYFIAIHKEQKSTWLSIVADTADDSLWGHYITSMYWSISTLSTVGYGDLHPVNTKEMVFDIFFMLFNLGLTSYIIGNMTNLVVQLTSRTRKYRDTVHAALGFAQRNQLSNRLQEQMLAHLFMKYRTDSEGLQQQEIVDTLPKAIRSSVAQYLFDTHVKNVYLFHGVSEDLRFQLVTEMKAEYFPPREDVILHNEAPTDLYILVTGAAEIIRHNNGMEQIIGEAHSSDVLGEIGVLCYRPQLFTVRTKRLTQLLRLNRTTFLNLAQSNVGDGTIIMNNFLHHLRESKFPGMEIIMAETEAMLARGKMELPLSTCFAAERNDDVLLQRLLKKGSNPNEVDKEGKTALHHAASKGNEHCVVLLLEYGADPNIKGKGASMAAENSNTSTRDMHEVVAPRVILSCPEKGAHAGKLVLLPKSLQELLDIGARKFDFSPTKVLTKEGAEIDDINLIRDGDHLFVAQD* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1016 694 Gene3D Jelly Rolls 364 530 IPR014710 -
Lan15g1016 694 ProSiteProfiles KHA domain profile. 629 694 IPR021789 -
Lan15g1016 694 Gene3D - 536 626 IPR036770 -
Lan15g1016 694 SUPERFAMILY Voltage-gated potassium channels 75 317 - -
Lan15g1016 694 CDD CAP_ED 396 501 IPR000595 -
Lan15g1016 694 Gene3D - 82 319 - -
Lan15g1016 694 SUPERFAMILY Ankyrin repeat 548 606 IPR036770 -
Lan15g1016 694 Pfam Cyclic nucleotide-binding domain 416 501 IPR000595 -
Lan15g1016 694 ProSiteProfiles cAMP/cGMP binding motif profile. 396 497 IPR000595 -
Lan15g1016 694 PRINTS EAG/ELK/ERG potassium channel family signature 93 100 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan15g1016 694 PRINTS EAG/ELK/ERG potassium channel family signature 116 126 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan15g1016 694 PRINTS EAG/ELK/ERG potassium channel family signature 127 136 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan15g1016 694 PRINTS EAG/ELK/ERG potassium channel family signature 264 281 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan15g1016 694 PRINTS EAG/ELK/ERG potassium channel family signature 290 301 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan15g1016 694 PRINTS EAG/ELK/ERG potassium channel family signature 308 317 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan15g1016 694 ProSiteProfiles Ankyrin repeat region circular profile. 574 604 - -
Lan15g1016 694 SMART ANK_2a 574 603 IPR002110 GO:0005515
Lan15g1016 694 SMART ANK_2a 539 570 IPR002110 GO:0005515
Lan15g1016 694 Pfam Ankyrin repeats (3 copies) 548 604 IPR002110 GO:0005515
Lan15g1016 694 ProSiteProfiles Ankyrin repeat profile. 574 606 IPR002110 GO:0005515
Lan15g1016 694 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 611 693 - -
Lan15g1016 694 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 23 605 - -
Lan15g1016 694 PANTHER POTASSIUM CHANNEL AKT1 611 693 IPR045319 GO:0005249|GO:0006813
Lan15g1016 694 PANTHER POTASSIUM CHANNEL AKT1 23 605 IPR045319 GO:0005249|GO:0006813
Lan15g1016 694 SUPERFAMILY cAMP-binding domain-like 321 517 IPR018490 -
Lan15g1016 694 SMART cnmp_10 396 513 IPR000595 -
Lan15g1016 694 Pfam KHA, dimerisation domain of potassium ion channel 629 691 IPR021789 -
Lan15g1016 694 Pfam Ion transport protein 81 323 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1016 Lan-Chr15 19301204 19306857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1016 601 694 Ion Channels AT2G25600 50.000 2.50e-19 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1016 K21867 - gmx:100802964 870.537