Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1014 ATGGAAGAAATCGATGAAGGGGTTAATGGGAGTGAAAGTAAGAACTCATTCGAGGGTCTACCTCCTAATCCAACTGCTGCTACTGTTTATCGCCAAATCACTCGCAATGATCCTTTGGTCCTTCCATGCAAAAATTCCCTTGTTCGTCATTCTTCTCTTAAGATAGAGGTGAAGTTGTCTGATGTATCTGCTGAGCCAGGGCGTGTAAGTGAAGAGTGTCAGTCTGATTTCCTTCCAGAACTTCGTTCCGGGGCACATGCTGATATTGGGTTCAGATCAACTATGGAAGATGCATATATTTGTGTTGACAATTTTATGCAGAATTTTGGGCTTAAGAAGCATATAGATGGACCCAGTGCTTTCTATGCGGTATTTGATGGACATGGTGGAAAAAATGCTGCAGACTTTGCTTGCCATCATTTGCTGAAGTGCATTCTCGAGGATGAAACTTTCCCATGTGATATTGAAAGGACAGTTACTTCAGCATTTCTGCAAACAGACAATGCCTTTGCAGAAGCTTGCTCTTTGGATGCTACCCTTGCATCTGGCACCACTGCATTGGCTGCGCTTGTCATTGGAAGGTTGCTGGTGGTGGCAAATGCTGGAGATTGTCGAGCAGTGCTTTGCCATCATGGGAAAGCAGTCGAAATGTCTAGAGATCATAAACCGGCTTGCAGCAAAGAGAAGAAGCGTATTGAGGCATCTGGTGGGTATGTCTATGATGGATATCTTAATGGACAACTTAATGTTGCTCGTGCCCTTGGTGACTGGCACATGGAAGGAATGAAAGGCAGAGATGGCGGACCACTCAGCGCAGAACCTGAACTTATGACTATGAAACTCACTGCTGAGGATGAATTTCTCATCATAGGTTGCGATGGGATATGGGATGTATTCAGGAGCCAAAATGCAGTGGATTTTGCTCGGCGCAGGCTTCAGGTGCACAACGACCCCACCATGTGTAGTAAGGATCTGGTTGATGAGGCTCTAAAGAGAAAGAGTGGAGACAATTTATCTGCTGTTGTGGTTTGCTTCCAGCAGCAGCCTCCACCTAACTTGGTGGCTCCACGCTCTAGAGTGCATAGGAGCTTCTCTGCTGAAGGATTGAGGGAGTTGCAAAGCTTCTTGGATGGCTTGCATAATTGA 1146 0.4581 MEEIDEGVNGSESKNSFEGLPPNPTAATVYRQITRNDPLVLPCKNSLVRHSSLKIEVKLSDVSAEPGRVSEECQSDFLPELRSGAHADIGFRSTMEDAYICVDNFMQNFGLKKHIDGPSAFYAVFDGHGGKNAADFACHHLLKCILEDETFPCDIERTVTSAFLQTDNAFAEACSLDATLASGTTALAALVIGRLLVVANAGDCRAVLCHHGKAVEMSRDHKPACSKEKKRIEASGGYVYDGYLNGQLNVARALGDWHMEGMKGRDGGPLSAEPELMTMKLTAEDEFLIIGCDGIWDVFRSQNAVDFARRRLQVHNDPTMCSKDLVDEALKRKSGDNLSAVVVCFQQQPPPNLVAPRSRVHRSFSAEGLRELQSFLDGLHN* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1014 381 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 71 367 - -
Lan15g1014 381 ProSitePatterns PPM-type phosphatase domain signature. 121 129 IPR000222 GO:0043169
Lan15g1014 381 Pfam Protein phosphatase 2C 84 337 IPR001932 -
Lan15g1014 381 SUPERFAMILY PP2C-like 77 347 IPR036457 -
Lan15g1014 381 SMART PP2C_4 72 343 IPR001932 -
Lan15g1014 381 ProSiteProfiles PPM-type phosphatase domain profile. 82 345 IPR001932 -
Lan15g1014 381 MobiDBLite consensus disorder prediction 1 23 - -
Lan15g1014 381 CDD PP2Cc 82 345 IPR001932 -
Lan15g1014 381 Gene3D - 62 349 IPR036457 -
Lan15g1014 381 PANTHER PROTEIN PHOSPHATASE 2C 71 367 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1014 Lan-Chr15 19296222 19299355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1014 1 381 PP2C-type Phosphatase Gene Family AT2G25620 67.677 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1014 K14803 - gmx:100815725 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1014 15 19296222 19299355 Lan3g1052 3 22828953 22832479 LSH