Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan15g1006 | ATGGGAGTGGATTATTACAATATATTGGAGGTGGAGAAAAATGCAAAGGAGGAAGATCTGAAGAAAGCATATAGAAAGTTAGTGATGAAATGGCACCCTGATAAAAATCCTACAAACAAAAAAGAAGCTGAAGCTAATTTCAAACAAATCTCTGAGGCCTATGAGGTATTAAGTGATCCTCAGAAAAGAGCAATTTATGATCAATATGGAGAAGAAGGGTTGAAAGATAGGCCACCACCTGGTTATGAACCAAGTGGTTTTAATCCAAGAAATGCAGAAGATATCTTTGCAGAATTCTTTGGAAGTAGCCCTTTCGGATTTAGTTCATCGGGACCAGGCAGGTCTATGAGATTTCAATCTGATGGAGGAGCAGGAACATTTGCTGGATTTAATGCATCTGATAATCTTTTTAGAACATATAGTGAGAGGCCTCATATGCAAAAGAAACCACCACCTGCTGAGAGTAAATTGCCTTGCACTTTGGAAGAGTTGTATTCTGGATCTACTAGGAAAATGAAGATTTCAAGGACTGTCATGGATGCTAAGAACAGAAGGGCGGTTCCAGAAACAGAAATATTAACTATAGAGGTAAAACCAGGTTGGAAGAAAGGAACAAAGATAACATTCCCGGACAAAGGAAACCAACAACCAAATCAACTAGCAGCAGATCTCGTATTCGTGATTGATGAAAAGCCTCATGATTTTTTCAAAAGAGATGGGAATGATCTCATTGTGAGTCAAAGGGTGTCACTAGCTGAGGCTATTGGTGGAACAACAATAAATATCACAACACTTGATAAACGAACTTTGTCTATACCAGTGACTGATATTGTGAGCCCTGGCTATGAGCTTGTTATTGCAAAAGAAGGAATGCCAATAACAAAGGAGAGAGGTTATAGAGGTGACTTGAGGATCAAGTTTGAAGTTAAGTTCCCTACAAGATTAACACCAGAGCAAAGAGCAGGACTTAAGAGAGCATTGGGAGCTTGA | 990 | 0.3909 | MGVDYYNILEVEKNAKEEDLKKAYRKLVMKWHPDKNPTNKKEAEANFKQISEAYEVLSDPQKRAIYDQYGEEGLKDRPPPGYEPSGFNPRNAEDIFAEFFGSSPFGFSSSGPGRSMRFQSDGGAGTFAGFNASDNLFRTYSERPHMQKKPPPAESKLPCTLEELYSGSTRKMKISRTVMDAKNRRAVPETEILTIEVKPGWKKGTKITFPDKGNQQPNQLAADLVFVIDEKPHDFFKRDGNDLIVSQRVSLAEAIGGTTINITTLDKRTLSIPVTDIVSPGYELVIAKEGMPITKERGYRGDLRIKFEVKFPTRLTPEQRAGLKRALGA* | 330 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan15g1006 | 329 | PANTHER | DNAJ HEAT SHOCK FAMILY PROTEIN | 1 | 328 | - | - | |
| Lan15g1006 | 329 | CDD | DnaJ_C | 154 | 315 | - | - | |
| Lan15g1006 | 329 | CDD | DnaJ | 4 | 59 | IPR001623 | - | |
| Lan15g1006 | 329 | SUPERFAMILY | Chaperone J-domain | 3 | 109 | IPR036869 | - | |
| Lan15g1006 | 329 | Pfam | DnaJ C terminal domain | 154 | 312 | IPR002939 | - | |
| Lan15g1006 | 329 | Pfam | DnaJ domain | 4 | 67 | IPR001623 | - | |
| Lan15g1006 | 329 | ProSitePatterns | Nt-dnaJ domain signature. | 47 | 66 | IPR018253 | - | |
| Lan15g1006 | 329 | SMART | dnaj_3 | 3 | 62 | IPR001623 | - | |
| Lan15g1006 | 329 | Gene3D | - | 232 | 328 | - | - | |
| Lan15g1006 | 329 | Gene3D | - | 153 | 231 | - | - | |
| Lan15g1006 | 329 | PANTHER | DNAJ HOMOLOG SUBFAMILY C MEMBER | 1 | 328 | - | - | |
| Lan15g1006 | 329 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 154 | 234 | IPR008971 | GO:0006457|GO:0051082 | |
| Lan15g1006 | 329 | Coils | Coil | 6 | 26 | - | - | |
| Lan15g1006 | 329 | PRINTS | DnaJ domain signature | 6 | 24 | IPR001623 | - | |
| Lan15g1006 | 329 | PRINTS | DnaJ domain signature | 24 | 39 | IPR001623 | - | |
| Lan15g1006 | 329 | PRINTS | DnaJ domain signature | 42 | 62 | IPR001623 | - | |
| Lan15g1006 | 329 | PRINTS | DnaJ domain signature | 62 | 81 | IPR001623 | - | |
| Lan15g1006 | 329 | Gene3D | DnaJ domain | 3 | 110 | IPR036869 | - | |
| Lan15g1006 | 329 | ProSiteProfiles | dnaJ domain profile. | 4 | 70 | IPR001623 | - | |
| Lan15g1006 | 329 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 235 | 321 | IPR008971 | GO:0006457|GO:0051082 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan15g1006 | Lan-Chr15 | 19238222 | 19241489 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lan15g1006 | 5 | 113 | C2H2 Transcription Factor Family | AT1G74250 | 30.973 | 3.20e-09 | 56.2 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan15g1006 | K09510 | - | twl:119996734 | 518.464 |