Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1005 ATGAACGTTAAATCGGCGCATTCGTCGTATCGTGATCGGACATATGAATTCGAAAGCATTGCGGAGAGGTTGAACAAATCACGATCACCTCCAATCACTAGTAATACAACCACCTCCGATGAACAGAGATCCGCCATTGCGTTTCAATCAGAATTCAATAGGAGAGCTTCTAAGATTGGCTATGCCATTCACCAAACCTCTCAGAAACTCGCTAACCTCGCTAAGCTGGCGAAGAGGAGTTCGGTGTTTGATGATCCGAGTATGGAAATACAAGAGCTTACGAGTGTTATAAAGCAAGATATCAATGCTCTCAATTCTGCTGTTGTTGATCTTCAATCACTCTCCGTTTCGCGAAATCAGAGTGGTGATGACACTACTAATCATTCAACTACTGTTGTTGATGACCTTAAGACACGTTTGATGACAACCACGAAGGACTTCAAAGATGTTCTCACCATGCGAACTCAGAACTTGAAAGTGCATGAGAATAGGAGGCAATTGTTCTCATCCTCTGCGTCTAAGGAAACTGCGAATCCTTTTGTTCGACAACGTCCATTGGCGACAAGATCAGCAGCTAGTTCTTCTAATGCTGCTGCTGCTGCACCCCCATGGGCTAGTAGTTCGGGCTCACCGTCTTCATCTCAGCTATTCCCTAAGAAACCGGTGGATGGGGAGAGTCAACCATTGCTGCAGCAACAGCAGCAACAAGGATGA 714 0.4538 MNVKSAHSSYRDRTYEFESIAERLNKSRSPPITSNTTTSDEQRSAIAFQSEFNRRASKIGYAIHQTSQKLANLAKLAKRSSVFDDPSMEIQELTSVIKQDINALNSAVVDLQSLSVSRNQSGDDTTNHSTTVVDDLKTRLMTTTKDFKDVLTMRTQNLKVHENRRQLFSSSASKETANPFVRQRPLATRSAASSSNAAAAAPPWASSSGSPSSSQLFPKKPVDGESQPLLQQQQQQG* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1005 237 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 6 26 IPR021538 -
Lan15g1005 237 MobiDBLite consensus disorder prediction 21 44 - -
Lan15g1005 237 SUPERFAMILY t-snare proteins 49 169 IPR010989 GO:0016020|GO:0016192
Lan15g1005 237 MobiDBLite consensus disorder prediction 162 178 - -
Lan15g1005 237 MobiDBLite consensus disorder prediction 186 237 - -
Lan15g1005 237 PANTHER SYNTAXIN 2 236 IPR045242 -
Lan15g1005 237 MobiDBLite consensus disorder prediction 26 44 - -
Lan15g1005 237 MobiDBLite consensus disorder prediction 187 237 - -
Lan15g1005 237 Gene3D - 44 237 - -
Lan15g1005 237 MobiDBLite consensus disorder prediction 162 181 - -
Lan15g1005 237 PANTHER SYNTAXIN-32-LIKE 2 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1005 Lan-Chr15 19220940 19222127 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1005 1 230 SNARE and Associated Proteins AT3G24350 56.078 3.20e-79 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1005 K08490 - gmx:100811494 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1005 15 19220940 19222127 Lan14g0787 14 14761091 14764578 LSH