LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan15g1000	ATGTTTACTTCGAAGAAAGAAGATGCCAAAATCGAAAAAGAAATTCGCGGTCTTCTCAAACTTCCTGCTAATCGAAGATGCATCAACTGCAATGTCTTGGGACCACAATATGTGTGTACAACTTTCAACACCTTTGTCTGCATAAATTGCAGTGGAATACATCGAGAATTTACCCATAGAGTAAAATCAGTATCCATGGCTAAATTTACTCCGGAAGAAGTAGCTGCTCTTGAAGCAGGTGGCAATGAGAGAGCAAAGCAGATTTATTTTAAAGAATGGGATTCTCAGCGTCATTCTTACCCTGATTCCAATAATATGCATAGACTTCGTGACTTTATCAAGCATGTGTACGTGGATCGAAAATTTACAGGTGAAAGGGGTGCTGTGGTTCTTCCCAGGCTTAAATTGAAAGACAAGGAGGACCCCTATGAAAATAAGAAGATTAGTTCATTTCGCATGGAGTCCAAAAGTAGTCCACATTATGAAGACAGAATTGAAAGATATAACAGCGATAGATCAAGTCCTGGTATAAGAAGTGATGACAAGAATCTTAGATTTTACTATGATGAAACTAGAAGCCCTAAATATGCCCAAAGATGTGCAAAGCCTGGCACCTTTGGCAGAAGTCCTATAAAATTTGAGGTTGTTGATGACAGGTTCCGAGATGATGAATCTAGAAATCGCAGGCTTTCAAATCTGGAATCGAAGTTTAAACAGCTTCAACCTGACCTTCAGCAGAAGAATGTAGAAGGATCCCAAGCCTATGTTGCACGCCCTGTGAGGGAAGTATCAAATGAGAATGGTTCATCTCCAAAAGTAGGTGAACCTTTTCAACCACAAAATAAGGCAGCTGCACAAAGTCAGGTCATTGGTGATAGTTCTGCTGTCAAAAAGCCATCTGAACAAAAAAATAATCCCCCAGAAAAATCTGCGGCCTCTTATGCTGCTGCTGGACCAGAAACACAGTCTATACCACAATCAAGTGAAAACAATTGGGCCTCATTTGATGCTTTTACGGATGACAATGCTCCTGAAACTTCAATCTCAACTGCCATGACATCTTCTATAATAGAGACAACACCTAAGGCGACATATGCAAATTCTTTAGATCTTTTACTTTCTGAATTATCAGGCCCAGTGACTGCAGCAACAGGTGCCATGTTTGAGGACTCACATAGTGGCAATAATCCACCAACTGCAACAGCAAGAAAAGAGAATGCTTGTGGGGATTTGAAGCACTTGCCGCCTACTTCAATGTGGCAGACAACTGCAACACCCACCATTAGTGATGCTTTGTCAGTTACATCAACCACTGTCAATGATATGAAACAATCTTCTACTGCAGCACCTCCACAAGTTGATCTATATAACATAGACAAATGCGTTAAGGTTTCACAAGAGCAGACATTGCCAAGCATCCAATTTCCTCCTTCTACATTGGTTAGTAGCTCTATGACACAACCAAGTACACCAGTCAGTTGTGTAGCTTCAAATGATCTGCTATCAGATGTTCCAAATTCATGTGATTCCTTTGGTGCTATTACTGAAATGTCTTCTCAAACAACCTCAAAGCCTGCTCAGAACACCAAACCTGATGTTGGATCCCAAATTTCTTCCGTGGAAACCAAGCCTAGTGGAAGAATGGAACTTCCGGCGGACCTTTTCACTACAAGCTACTCATCTGGCCCCGCACCAGTTACAGGTTGGCAGAATGTTCAACACTGTGGGAAGGGATATGGCTTGCAGTATTATCCTAATGCAATGCCTCCCTCAGCATTTCCCTTTGCAGCAAAGTCCTTAAACCCATTTGATCAAACTGAGGGCAAACCTTTAGCCCATGCCTCATCATTTCCTACTCTGGCATCCATGAATGGTGTACTACCTGATGCCTCACCCCTAATGCATTCTTCAAGCTTCAGTTCTTTGGGATCAATGTTGCCTCAGACCCCAAGTTATGCATCTCCAATTGCTCCACAATCCACCTTACCATCTGAATTTCCTTCTGGTTTGTACTTTGGGCAAGTTAACAATAACATGCAACCTCCCAGATCTGCAAGTGTTGGCAGCTTCAATGGATCTCCAAATTCATCATATTCTAAGATGGGAGTGGGAGGAGGAAACCCATTCGAAAGTGTTTGA	2139	0.4198	MFTSKKEDAKIEKEIRGLLKLPANRRCINCNVLGPQYVCTTFNTFVCINCSGIHREFTHRVKSVSMAKFTPEEVAALEAGGNERAKQIYFKEWDSQRHSYPDSNNMHRLRDFIKHVYVDRKFTGERGAVVLPRLKLKDKEDPYENKKISSFRMESKSSPHYEDRIERYNSDRSSPGIRSDDKNLRFYYDETRSPKYAQRCAKPGTFGRSPIKFEVVDDRFRDDESRNRRLSNLESKFKQLQPDLQQKNVEGSQAYVARPVREVSNENGSSPKVGEPFQPQNKAAAQSQVIGDSSAVKKPSEQKNNPPEKSAASYAAAGPETQSIPQSSENNWASFDAFTDDNAPETSISTAMTSSIIETTPKATYANSLDLLLSELSGPVTAATGAMFEDSHSGNNPPTATARKENACGDLKHLPPTSMWQTTATPTISDALSVTSTTVNDMKQSSTAAPPQVDLYNIDKCVKVSQEQTLPSIQFPPSTLVSSSMTQPSTPVSCVASNDLLSDVPNSCDSFGAITEMSSQTTSKPAQNTKPDVGSQISSVETKPSGRMELPADLFTTSYSSGPAPVTGWQNVQHCGKGYGLQYYPNAMPPSAFPFAAKSLNPFDQTEGKPLAHASSFPTLASMNGVLPDASPLMHSSSFSSLGSMLPQTPSYASPIAPQSTLPSEFPSGLYFGQVNNNMQPPRSASVGSFNGSPNSSYSKMGVGGGNPFESV*	713

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan15g1000	712	MobiDBLite	consensus disorder prediction	316	346	-	-
	Lan15g1000	712	MobiDBLite	consensus disorder prediction	517	547	-	-
	Lan15g1000	712	PANTHER	ARFGAP/RECO-RELATED	1	693	IPR044820	GO:0005096
	Lan15g1000	712	SMART	arf_gap_3	12	130	IPR001164	GO:0005096
	Lan15g1000	712	CDD	ArfGap_AGFG	12	122	-	-
	Lan15g1000	712	Gene3D	Arf GTPase activating protein	2	131	IPR038508	-
	Lan15g1000	712	ProSiteProfiles	ARF GTPase-activating proteins domain profile.	12	130	IPR001164	GO:0005096
	Lan15g1000	712	PANTHER	ARFGAP/RECO-LIKE ZINC FINGER DOMAIN-CONTAINING PROTEIN	1	693	-	-
	Lan15g1000	712	SUPERFAMILY	ArfGap/RecO-like zinc finger	12	123	IPR037278	-
	Lan15g1000	712	MobiDBLite	consensus disorder prediction	149	181	-	-
	Lan15g1000	712	MobiDBLite	consensus disorder prediction	263	309	-	-
	Lan15g1000	712	MobiDBLite	consensus disorder prediction	517	543	-	-
	Lan15g1000	712	MobiDBLite	consensus disorder prediction	263	346	-	-
	Lan15g1000	712	MobiDBLite	consensus disorder prediction	674	712	-	-
	Lan15g1000	712	Pfam	Putative GTPase activating protein for Arf	13	124	IPR001164	GO:0005096
	Lan15g1000	712	MobiDBLite	consensus disorder prediction	674	702	-	-
	Lan15g1000	712	PRINTS	HIV Rev interacting protein signature	24	43	IPR001164	GO:0005096
	Lan15g1000	712	PRINTS	HIV Rev interacting protein signature	43	60	IPR001164	GO:0005096
	Lan15g1000	712	PRINTS	HIV Rev interacting protein signature	61	82	IPR001164	GO:0005096

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan15g1000	Lan-Chr15	19199428	19205288	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan15g1000	12	122	C2H2 Transcription Factor Family	AT4G05330	35.345	1.46e-13	70.9

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan15g1000	-		-	lang:109327488	1430.23