Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0997 ATGTCGTTGCCATTTCTACAAAGAAGAGGTTCGGGTGGTGAAATCAGGAACTTAGCATCAGTTTCAAGCAGCCTCTTACCAGCTTTTGGTACCATCTTTGATGAAGGTTACTTGAACCTCAAAAAATATGTCATCGCTCCCTATGACCGTAGATATAGGTTGTGGCAAACGTTCCTAGTGGCACTGGTGGTGTACTCAGCATGGGCATCGCCATTCGAGCTAGCTTTCCAACGGTCAGTTAGGAGCCTATCGCCGGTTGATCTTGTAGTCGACGCCTTCTTTGCGGCTGATATAATCCTTACATTCTTTGTGGCTTACTTGGATGCATCAACTTACCTCCTAGTTGATGATCATAAGAAGATTGCTATCAGGTACGTCAAAAAGTTGCACTTTGCCATGGATCTAGCATCAACTATACCAATTCAGCAGATATACCAAGTTCTGTCAGACAAATCACACAAAACCGAGGTGTTCGGTTTCCTAAATATGCTTCGGCTCTGGCGATTAAGGCGTGTCAGTGAACTCTTCACAAGGCTAGAGAAAGACATACGGATTAGCTACTCAGCAACAAGATTTTGTAAACTGATATGCGTTACGCTATTTGCAATCCACTTCGCAGGCTGCATGTATTTTTGGTTAGCAGTCCATCACAAAACACCCGAAAACACATGGATCGGGATGCAAGTACAGGATTTTAAACATGAGAGCAATTGGCACAGTTATACCTATTCCATGTACTGGTCTATTGTAACTCTTACGACTGTTGGATATGGAGATTTACATGCAGTAAATACAACGGAGAAGGTTTTCAATATTTTATATATGCTGTTTAACATCGGCCTCACTGCATATATAATCGGAAACATGACAAATCTGGTGGTTCATAGCACTGTCCGAACCTTTGCCATGAGGGATGCCTTCAACAAAATACTACAATACGCAAGCAAGAATAGACTCCCGGAAGGTTTGAAAGAGCAAATGTTGGCACATTTGCAATTGAAGTTCAAGACAGCAGAGTTACAGCAAGAAGAAGTGCTACAGGACCTGCCTAAAGCAATTAGATCCAGTATTGCTCAGCATCTTTTCCACGACGTAGTTGAAAAAGCATATTTATTTAAAGGAGTCTCTGATGATTTTATCACCCAGCTGGTGTCCGAAATGAAAGCAGAATACTACCCACCTAAGGTTGACATTATCTTGCAAAATGAGATGCCAACAGATTTCTACATTTTGGTATCTGGATCAGTGGATGTGTTGATATACAAGAATGGAACCGAACAGTTTCTGTTCAAACTAGAACCTGGAGGCTTGGCAGGAGAAATGGGTGTGATGTTTAATATTCCACAACCTTTTACAATCAGATGTAAGAGGCTCTCACAGGTCATACGAGTAAATCATCAACATTTCAAGCAGATGGTGCAGCCATTCAGTGACGATGGGAAGGCAATCATCAGCAACTTCATTAAGTATATGAAGGATCTCAATGGCATGTTGCCAGAAGAAATACCATATGTGACAGACTTGCTGAATGAACTGAACCACGAGCATCTAGCACAAAGTGAGGGCACACAGGATGAAGATGATCGATATAAAGAAGGAATAACAGGAAATTTCAATCCTCTGTCAAGCCTAGCTCCCATCAGGGTTAAAATCCATGGATATCATCCCAATGGAAACAAAATGGGAAACAAAACAGCACAAAAACTCATACTTCTCCCAGATTCCATAGAAGATCTTTTCAAAGTAGCAGAGAAGAAGTTTGGAGAAAGAGGAAGCAAGATTCTTATGAGTGATGGGTCAGAAGTAGAAGAATTGGGCGTCTTAAGAGAGAACGACGAGTTATATATCTTCTAA 1854 0.4132 MSLPFLQRRGSGGEIRNLASVSSSLLPAFGTIFDEGYLNLKKYVIAPYDRRYRLWQTFLVALVVYSAWASPFELAFQRSVRSLSPVDLVVDAFFAADIILTFFVAYLDASTYLLVDDHKKIAIRYVKKLHFAMDLASTIPIQQIYQVLSDKSHKTEVFGFLNMLRLWRLRRVSELFTRLEKDIRISYSATRFCKLICVTLFAIHFAGCMYFWLAVHHKTPENTWIGMQVQDFKHESNWHSYTYSMYWSIVTLTTVGYGDLHAVNTTEKVFNILYMLFNIGLTAYIIGNMTNLVVHSTVRTFAMRDAFNKILQYASKNRLPEGLKEQMLAHLQLKFKTAELQQEEVLQDLPKAIRSSIAQHLFHDVVEKAYLFKGVSDDFITQLVSEMKAEYYPPKVDIILQNEMPTDFYILVSGSVDVLIYKNGTEQFLFKLEPGGLAGEMGVMFNIPQPFTIRCKRLSQVIRVNHQHFKQMVQPFSDDGKAIISNFIKYMKDLNGMLPEEIPYVTDLLNELNHEHLAQSEGTQDEDDRYKEGITGNFNPLSSLAPIRVKIHGYHPNGNKMGNKTAQKLILLPDSIEDLFKVAEKKFGERGSKILMSDGSEVEELGVLRENDELYIF* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0997 617 Pfam Cyclic nucleotide-binding domain 391 474 IPR000595 -
Lan15g0997 617 Pfam Ion transport protein 53 299 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lan15g0997 617 Pfam KHA, dimerisation domain of potassium ion channel 548 616 IPR021789 -
Lan15g0997 617 Gene3D Helix hairpin bin 299 360 - -
Lan15g0997 617 PANTHER POTASSIUM CHANNEL, VOLTAGE-DEPENDENT, EAG/ELK/ERG-RELATED 54 616 - -
Lan15g0997 617 PANTHER POTASSIUM CHANNEL, VOLTAGE-DEPENDENT, EAG/ELK/ERG-RELATED 3 53 - -
Lan15g0997 617 SUPERFAMILY cAMP-binding domain-like 300 488 IPR018490 -
Lan15g0997 617 SMART cnmp_10 371 488 IPR000595 -
Lan15g0997 617 ProSiteProfiles cAMP/cGMP binding motif profile. 371 490 IPR000595 -
Lan15g0997 617 Gene3D Jelly Rolls 361 500 IPR014710 -
Lan15g0997 617 SUPERFAMILY Voltage-gated potassium channels 47 293 - -
Lan15g0997 617 PRINTS EAG/ELK/ERG potassium channel family signature 87 97 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan15g0997 617 PRINTS EAG/ELK/ERG potassium channel family signature 98 107 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan15g0997 617 PRINTS EAG/ELK/ERG potassium channel family signature 241 258 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan15g0997 617 PRINTS EAG/ELK/ERG potassium channel family signature 267 278 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan15g0997 617 PRINTS EAG/ELK/ERG potassium channel family signature 285 294 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lan15g0997 617 Gene3D - 53 295 - -
Lan15g0997 617 CDD CAP_ED 371 484 IPR000595 -
Lan15g0997 617 PANTHER POTASSIUM CHANNEL AKT1 3 53 IPR045319 GO:0005249|GO:0006813
Lan15g0997 617 PANTHER POTASSIUM CHANNEL AKT1 54 616 IPR045319 GO:0005249|GO:0006813
Lan15g0997 617 ProSiteProfiles KHA domain profile. 548 617 IPR021789 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0997 Lan-Chr15 19180384 19186892 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0997 3 617 Ion Channels AT4G32650 59.236 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0997 K21867 - gmx:100794620 932.554