Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0996 ATGGAGAATCAAACGAATCACGAAACCTCAGAGCAACCGAATAATGAAGCTGAATTGCAGGAACACGATGAAGAAGATGATTCTAAGAAGGAAGAAGAAGAATTGGTTGCCAAAGTTAACAAGCTTATGGACAAAATCACTGCTTCACCTGATAACCCTAAACCAACCGTTCTTCACGCTCTTGCCTCTATTCTTGAGAACCAGGAATCTCGATACATGGAAGAGAATGATCATTCTTCCTCAAGTAATGGACGTGCGGCTCATAGCATTGGCCGCCTTGGGAGTATTATCCGGGAAAATGATGAATTCTTCGAGTTAATATCTTCAAAGTTTCTATTAGAATCGAGATACTCAATTTCTGTTCAAGTTGCTTCTGCCAGACTTCTCCTATGCTGTTCCCTAACTTGGATTTATCCTCATGTTTTTGAAGAACCTGTAATAGAAAACATCAAAGATTGGGTGATGGACGAAAGTGCCATATTGTCAGCTGAAGACCAAAGTATGAAGCATCATCCAAGGAAACGGGAAGCTTCTGATTCTGAAATGTTGAAAACCTATTCTACTGGACTCCTTGCTGTGTGTTTGATTGGGGGAGGTCAAGTAGTGGAAGATGTATTAACATCTGGTTTGTCAGCTAAGCTTATGCGTTATCTACGTCTACGTGTGCTGGGAGACACAAGTAGCACTCAGAAAGATATTGGCCATTCAACAGAGAGTAGGCATGCCACTGGGAATAGTTCACTGAGAGGTAGAGATGATGGTCGTAGTAGATTTCGCCACCTCATAGAAGCTAGTCGTTTAGATGATACAAGGATGATTGATGAGAGATCTTTAGAAGAACAAATTCATGAAAGGGTTCCAGATAGAAACATTGGTGAACAAAATTGCCCCGATAATTCTTGGGTAGGTGGTGAACCACCTGATGGGCTGGGTGAAGATGCTGATATCTGTGAAGTAGATGCTGATGGGGAGGATAGATGGCACAGTTTAGATGCACGTGATGGAAGGGTAAAGTATGGTGAGCATGATGACAATGTTAATGATTCTTCAAGGCGGCGTGCAAAATGGGCAAGATCCCGGGGGAAAGCAAGGGTCAATGAGAGTACTATTGAAAGTGAACCTGTTTTGTCATCTCCTGGTTCTGGTAGTCGATTAGGACAGGGACGGAGTGTTCGAGATAGGAGCATATCAAGGAATTCTGATGCTAGGAAGGTGCCTGATTCTAAGAAGACTCATGTGCGGGCCACTACTGAGACTTCACTTTTGGAAAGAGAGGATAATGATGATTGTTTCCAAGAATGCCAGATTGGAAGTAAAGATATTTCTGATCTTGTTCGGAAAGCTGTCCGAGCTGCTGAAGCTGAAGCCAGGTCAGCCTATGCACCTGAAGAAGCAGTCAAAGCAGCGGGTGATGCTGCTGCTGACCTTGTTAAAACTGCAGCTTCAGAGGAATTTAAATCAACTAATGATGAAGAAGCAGCTGTTTTGGCTGCTTCAAGAGCTGTATCAACTGTTATTGATGCTGCATCTGCTGTTGAACTTTCAAGGAGCTCCATTGGCATCAATTCTGAGACCGAGAATGCGAGTTGCAGAGAAACAGACTCTGGTGAGGATCTTGAAGATTACTTCATCCCAGATACTCAATCACTTTCAAAGTTGAGGGAAAAATATTGCATTCAGTGTCTTGAGTTACTCGGAGAATATGTAGAAGTTCTTGGCCCTGTGTTGCTTGAGAAAGGGGTCGATGTGTGTCTTGCACTTCTGCAGCAGAACTCTAAACACCAGGAAGCATCCAAGGTTGCATTACTGCTGCCTGATGTCATGAAGATGATCTGTGCTTTGGCAGCTCATAGGAAATTTGCTGCTCTATTTGTTGACCGTGGGGGAATCCAAAAGCTACTTGCTGTCCCTAGAATGACTCAAACGTTCTTTGGCCTCTCTTCTACTCTATTTACTATTGGTTCTCTTCAGGGGATAATGGAACGTGTTTGTGCTCTTCCATCAGATGTTGTTTATCATGTAGTTGAGTTGGCTCTCCAACTCATTGACTGCGACCAAGACCAAGCCCGGAAGAATGCAGCATTGTTTTTTGCTGCTGCATTTGTCTTCAGAGCAGTGCTTGATGCTTTTGATTCCCAAGATGGATTACAGAAACTACTAGGCCTTTTAAATGATGCTGCATTAGTAAGATCTGGAGTAAATTCTGGAGCCTTGGGCTTATCCAACACAGGATCACTTCGAAATGATCGGTCCCCGGCAGAAGTTCTGACATCATCTGAGAAGCAGATAGCTTACCACACTTGTGTTGCTTTGCGGCAATATTTCAGAGCACATCTCCTCTTATTAGTGGATTCTATCCGTCCAAACAAAAACAACCGCAGTGCTGCTAGGAATATTCCAAGTGTAAGGGCTGTGTACAAGCCGCTTGACATTAGTAATGAGGCTATTGATGCAGTATTCCTGCAATTGCAAAAAGATCGGAAGCTTGGTCCTGCATTTGTGAGAACACGTTGGCCCCCAGTTGAGAAGTTCATGGCATCCAATGGACACATTACTATGTTGGAATTGTGTCAGGCCCCATCTGTGGAGCGTTATCTGCATGATTTGCTTCAGTTTGCGCTGGGTGTTCTGCATATTGTTACATTGGTACCTAGCAGCCGTAAAATGATTGTAAATACAACGTTAAGCAATAACCGTGTTGCTATTGCAGTAATTTTGGATGCAGCAAATATTGTTGGTAGTCATGTGGACCCTGAGATAATTCAGCCAGCATTAAATGTTTTAGTGAACCTTGTTTGTCCTCCACCTTCAATTAGCAATAAACCCACTGTAGTTACACAAGGGCAGCAGTTTCCTTCTGCCCAAATTACGAATGGTCCTCCCTCGGAGACTAGAGATAGAACTGCTCAATCCAGTCAAATTGATCCTAGGGAGAGGAATGGGGAAACCAGTGCTGTAGATAGAGGCTGTGCTGCGATACATAGTACACAAAACGTAAACAACAATCCACAAACTCCTGGTTCGACTGCAGCTTCTGGTTTGGTTGGCGACCGCAGAATATCTCTGGGAGCGGGAGCTGGTTCTGCTGGCCTTGCTGCACAACTGGAACAAGGATATCGCCAATCAAGAGAAGCTGTTCGGTCTAATAATGGTATAAAGGTTCTTCTGCATCTCCTCCAACCACGCATATATTCACCTCCCGCTGCATTGGACTGTCTTCGTGCTCTAGCTTGTCGAGTCTTGCTTGGATTAGCCAGAGATGATACTATTGCACAGATATTGACAAAACTTCAGGTTGGGAAAAAGCTTTCGGAATTAATTCGGGATTCTGGAAGCCAGACACCTGGAACAGAGCAGGGTAGGTGGCAAGCTGAACTTTCACAGGCTGCAATTGAGCTAATTGGGATAGTGACTAATTCTGGGCGTGCAAGTACATTAGCTGCTACTGATGCAGCTACTCCTACCTTAAGGCGCATAGAAAGAGCAGCAATAGCTGCTGCCACTCCTATTACCTATCATGCAAGGGAACTGCTGCTCCTAGTTCATGAACATCTGCAGGCATCTGGATTGTCACATACCGCTTCGATGTTGCTCAAGGAGGCTCAGTTGACTCCTTTGCCATCACTGATTGCTCCATCTTCTCTTGCGCAACAACCTAACACACAGGAAGCTTCTTCAATACAAATTCAGTGGCCCTCTGGTCGTACTGCTGGATTTCTGACTAACAAATTAAAGATTAATGCAAGAGATGAGGAGCCTAGCTTGAAAATTGGAACTGTCTCTGCAAAGAAAAAATCACTGAGTTTTTCAGCATCTTTTGGTAGTCATTCAAGACATCAACTTGTTGATTCTCTGCAGTCACCAGGGAGAAAATGCTTTGGTACAGTGAAAGAGTCTTCAGAAACTAGTATAGTGGGGACTCCATCTGAATCTTCAGTGAAACATTATATTGATGCTGGATCCACCAAGACTCCAATGTTTCCTATGAAACGCAAGTTATCTGATGTGAAGGATATAGCAATGCTTTCATCGTCTGGAAAGCGACTGAATGTTGGGGATCAAGGACTTCGTTCTCCTATTTGTTCAAGTGCAATTCGTAAAAGCAGCCTGCAGACTGATGCTGCAGGGTTTTTTACACCAATTTCAAACATAAGAAGTCAACAAAACCGCTGTATAGCTGACTCTGTGGATGATAATCAATACAATATCTCAAACCCAGGTCAGATGATACCATCTTGCCAAGTATTTAATGAGCTTCAGGTTAATAACACAGAGCGTATAACGCTAGATTCCTTAGTGGTTCAGTATCTGAAGCATCAGCATCGCCAATGCCCAGCCCCTATTACCACCCTTCCTCCACTCTCTCTTCTACACCCGCATGTTTGTCCTGAACCAAAGCGAAGTCTTGATGCCCCTTCTAATGTGACAGCTCGGCTTGGTACACGCGAATATAAATTTATGTACGGTGGAGTGCATGGGAATCGCAGAGATCGCCAATTTGTTTATAGCCGGTTTAGGCCGTGGCGCACTTGTCGGGATGATGCTGGTGACTTGTTTACTTGTATTACCTTTGTTGGGGACTCCTCTCATATTGCTGTTGGGAGTCACAACGGAGATCTCAAATTTTTTGACTCCAACAACAGCAATGTGGTGGAGAGCTACACAGGTCACCAAAACCCTTTGACCCTTGTTCAGTCTTTTGTTTCTGGTGACAATCAGCTATTGCTTTCTTCAAGCTCCCAAGATGTTAAGCTGTGGGATGCAACATCAATTTTAAATGGTCCTACCCATTCATTTGAAGGGTGTAAGGTTGCCAGGTTTAGCAATTCTGGAAATGTTTTTGCGTCCTTGCCATCAGAATCTGCCCGACGGGAAATCCTATTCTATGATGTCCAAACTTGTCAGTTGGAATCAAAGCTGACAGATCCACTTGAAGCTTCTACCGGGAGGAGTCATGTTTATTCTTTAATTCACTTTAGCCCTTCTGACTCAATGGTGCTTTGGAATGGTGTCTTATGGGACCGGCGGGTTTCTGGGCCTGTTCATCGCTTCGAACAGTTGACAGACTATGGGGGTGGAGGTTTTCATCCTGCTGGCAATGAGGTTATTATAAACTCTGAAGTCTGGGATTTGCGAAAGTTCAGACTGCAACGAAGTGTACCTTCGTTAGATCAAACTTCAATAACATTCAATGCATGTGGTGATGTAATGTATGCAATCTTAAGGAGGAATCTTGAGGATGTTATGTCAACAGTTCACAATGCACGTCGTTGCAAGCATCCTCTTTATTCCGCTTTCCGCACATTGGATGCAATCAATTATTCTGACATTGCTACTACACCTGTGGATCGTTGTGTTCTTGATTTTGCTTCTGAGCCAACTGATTCATTTGTTGGGTTGGTTACTATGGATGATCAAGATGAGATGTATGCATCAGCCAGAATATATGAAATCGGTCGTCGGAGACCAACTGATGATGATTCAGATCCTGATGATGCGGAAAGCGAGGAGGAAGATGACGAAGATGAAGATGATGATGATATTGATGTAGATCCTCTCTTAGGCCCTGGTTTCGGTGGAGACAGTGAGAGTGATGGTGATGACATGAGTAATGATGAAGATGACGATGATGACGACGACGACGATGATATTATAAGTTACATCGATGGTGAAGAAGGAGATTTTCTTTTGGATGATGTAGACTTTGATGGAGGAAATGAAACGTTAGAGATTGCTTCAGGTGATGAGGATGATGATGATAGTCAAGGGTATGAAACTTTAAGTAGTGATGAAGAGGATTACATAAATAATCGTAATCGCTTTGGTTATTAA 5832 0.4352 MENQTNHETSEQPNNEAELQEHDEEDDSKKEEEELVAKVNKLMDKITASPDNPKPTVLHALASILENQESRYMEENDHSSSSNGRAAHSIGRLGSIIRENDEFFELISSKFLLESRYSISVQVASARLLLCCSLTWIYPHVFEEPVIENIKDWVMDESAILSAEDQSMKHHPRKREASDSEMLKTYSTGLLAVCLIGGGQVVEDVLTSGLSAKLMRYLRLRVLGDTSSTQKDIGHSTESRHATGNSSLRGRDDGRSRFRHLIEASRLDDTRMIDERSLEEQIHERVPDRNIGEQNCPDNSWVGGEPPDGLGEDADICEVDADGEDRWHSLDARDGRVKYGEHDDNVNDSSRRRAKWARSRGKARVNESTIESEPVLSSPGSGSRLGQGRSVRDRSISRNSDARKVPDSKKTHVRATTETSLLEREDNDDCFQECQIGSKDISDLVRKAVRAAEAEARSAYAPEEAVKAAGDAAADLVKTAASEEFKSTNDEEAAVLAASRAVSTVIDAASAVELSRSSIGINSETENASCRETDSGEDLEDYFIPDTQSLSKLREKYCIQCLELLGEYVEVLGPVLLEKGVDVCLALLQQNSKHQEASKVALLLPDVMKMICALAAHRKFAALFVDRGGIQKLLAVPRMTQTFFGLSSTLFTIGSLQGIMERVCALPSDVVYHVVELALQLIDCDQDQARKNAALFFAAAFVFRAVLDAFDSQDGLQKLLGLLNDAALVRSGVNSGALGLSNTGSLRNDRSPAEVLTSSEKQIAYHTCVALRQYFRAHLLLLVDSIRPNKNNRSAARNIPSVRAVYKPLDISNEAIDAVFLQLQKDRKLGPAFVRTRWPPVEKFMASNGHITMLELCQAPSVERYLHDLLQFALGVLHIVTLVPSSRKMIVNTTLSNNRVAIAVILDAANIVGSHVDPEIIQPALNVLVNLVCPPPSISNKPTVVTQGQQFPSAQITNGPPSETRDRTAQSSQIDPRERNGETSAVDRGCAAIHSTQNVNNNPQTPGSTAASGLVGDRRISLGAGAGSAGLAAQLEQGYRQSREAVRSNNGIKVLLHLLQPRIYSPPAALDCLRALACRVLLGLARDDTIAQILTKLQVGKKLSELIRDSGSQTPGTEQGRWQAELSQAAIELIGIVTNSGRASTLAATDAATPTLRRIERAAIAAATPITYHARELLLLVHEHLQASGLSHTASMLLKEAQLTPLPSLIAPSSLAQQPNTQEASSIQIQWPSGRTAGFLTNKLKINARDEEPSLKIGTVSAKKKSLSFSASFGSHSRHQLVDSLQSPGRKCFGTVKESSETSIVGTPSESSVKHYIDAGSTKTPMFPMKRKLSDVKDIAMLSSSGKRLNVGDQGLRSPICSSAIRKSSLQTDAAGFFTPISNIRSQQNRCIADSVDDNQYNISNPGQMIPSCQVFNELQVNNTERITLDSLVVQYLKHQHRQCPAPITTLPPLSLLHPHVCPEPKRSLDAPSNVTARLGTREYKFMYGGVHGNRRDRQFVYSRFRPWRTCRDDAGDLFTCITFVGDSSHIAVGSHNGDLKFFDSNNSNVVESYTGHQNPLTLVQSFVSGDNQLLLSSSSQDVKLWDATSILNGPTHSFEGCKVARFSNSGNVFASLPSESARREILFYDVQTCQLESKLTDPLEASTGRSHVYSLIHFSPSDSMVLWNGVLWDRRVSGPVHRFEQLTDYGGGGFHPAGNEVIINSEVWDLRKFRLQRSVPSLDQTSITFNACGDVMYAILRRNLEDVMSTVHNARRCKHPLYSAFRTLDAINYSDIATTPVDRCVLDFASEPTDSFVGLVTMDDQDEMYASARIYEIGRRRPTDDDSDPDDAESEEEDDEDEDDDDIDVDPLLGPGFGGDSESDGDDMSNDEDDDDDDDDDDIISYIDGEEGDFLLDDVDFDGGNETLEIASGDEDDDDSQGYETLSSDEEDYINNRNRFGY* 1944
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0996 1943 MobiDBLite consensus disorder prediction 943 985 - -
Lan15g0996 1943 ProSiteProfiles LIS1 homology (LisH) motif profile. 1173 1205 IPR006594 GO:0005515
Lan15g0996 1943 SUPERFAMILY ARM repeat 675 1135 IPR016024 -
Lan15g0996 1943 MobiDBLite consensus disorder prediction 1865 1927 - -
Lan15g0996 1943 MobiDBLite consensus disorder prediction 338 367 - -
Lan15g0996 1943 MobiDBLite consensus disorder prediction 1815 1943 - -
Lan15g0996 1943 Pfam LisH 1176 1201 IPR006594 GO:0005515
Lan15g0996 1943 MobiDBLite consensus disorder prediction 285 315 - -
Lan15g0996 1943 MobiDBLite consensus disorder prediction 394 418 - -
Lan15g0996 1943 PANTHER VPRBP PROTEIN-RELATED 331 1279 IPR033270 GO:0016567
Lan15g0996 1943 PANTHER VPRBP PROTEIN-RELATED 6 269 IPR033270 GO:0016567
Lan15g0996 1943 PANTHER VPRBP PROTEIN-RELATED 1307 1816 IPR033270 GO:0016567
Lan15g0996 1943 MobiDBLite consensus disorder prediction 338 418 - -
Lan15g0996 1943 MobiDBLite consensus disorder prediction 943 979 - -
Lan15g0996 1943 SMART WD40_4 1504 1544 IPR001680 GO:0005515
Lan15g0996 1943 SMART WD40_4 1547 1587 IPR001680 GO:0005515
Lan15g0996 1943 MobiDBLite consensus disorder prediction 1829 1851 - -
Lan15g0996 1943 SUPERFAMILY WD40 repeat-like 1508 1735 IPR036322 GO:0005515
Lan15g0996 1943 PANTHER BNAA03G51310D PROTEIN 1307 1816 - -
Lan15g0996 1943 PANTHER BNAA03G51310D PROTEIN 6 269 - -
Lan15g0996 1943 PANTHER BNAA03G51310D PROTEIN 331 1279 - -
Lan15g0996 1943 MobiDBLite consensus disorder prediction 1 36 - -
Lan15g0996 1943 MobiDBLite consensus disorder prediction 370 393 - -
Lan15g0996 1943 MobiDBLite consensus disorder prediction 228 244 - -
Lan15g0996 1943 Gene3D - 1505 1830 IPR015943 GO:0005515
Lan15g0996 1943 Coils Coil 14 34 - -
Lan15g0996 1943 MobiDBLite consensus disorder prediction 228 254 - -
Lan15g0996 1943 SMART Lish 1173 1205 IPR006594 GO:0005515
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lan15g0996 Lan-Chr15 19170730 19179290 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0996 1531 1737 U-box Gene Family AT2G33340 23.451 9.33e-06 48.5
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0996 K11789 - gmx:100796030 2735.29
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0996 15 19170730 19179290 Lan14g0783 14 14700142 14709081 LSH