Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0948 ATGGAGCAGAGTGAAGCGGCTTTCGATTCAGCTCCGGGGAGATCGGTTAGGCAATTGGATTTCACGGCTGCGCGTGGTGGTACGGCACACCTGAAACTGCCGCAGTGGCCGTCACAGTCGATTATACAGCCGCCATGTCAGTCGCCGCCAATGCAAGTGAAACCGCCGTGGTTATATCAGCAGATAGCTTCACAGTCTCAGGTAATGTCGCAATCGCAAGCAGCGCAACCGCGGCAGCTGGTATCGCCGGTACGGCTGACTCCGCATCCTGTGCAGAAACTTCCGGTGAAGATGTTACAAGTCTCGAAGCAAGAGTCTCCTGAATCACGGCCTCGACCAAATGTGGGCTTAAAAGAGAGCACTCCAAAGAAACAAAAACAATGCAATTGTAAAAATTCCCGATGCCTCAAGTTGTACTGTGAGTGCTTTGCATCAGGGATTTATTGTGATGGCTGCAATTGTGTAAATTGTCATAATGATGTGGATAATGAGTCTGCCAGACAGGAGGCAGTGGGGGTAATATTGGAACGCAATCCAAATGCTTTCAAACCAAAAATTGATAGCAGTCCACAAGGATCACGAGAGTCCAAGGAAGATGTGTCTGAAATTCAAGTAGTAGGAAAGCACAATAAAGGATGTCACTGCAAGAAATCAGGTTGCCTTAAGAAGTATTGTGAGTGCTTCCAAAACAATATTCTCTGCTCTGAAAATTGTAAATGCATGGACTGCAAGAATCTTGAATTAAGTGACCAACAAAGAGCAGTTTTTAATGAAGAGCATAATCTAGTTCACACCAAACAGGCAGCTAATGCTGCCCTCAGTGGAGCATTTGGATCCTCTGGCTATGGAACACACACAACAGCCAAGAAGAGGAAAGCTCAGAAAATATTATCCGGCAATTCAGCCACAGATCAAACTGTTGACCAGACTGCTCAATATCGACAGATTTTTAATCAGGAAATTGATCCTATAGCTTCATCACCTTCACCTTTGTCATCTTCCTTTGTATCCGATACTGCCAACACAAGAATTTCAGGGTCTTTAAGATCTACATACAGGTCCCTATTGGCGGATGTCCTCCAGCCAGAGAATGTGAAGAATCTGTGTTCACTTTTAGTCATGCTCTCAGGAGTTGCTGTAACGACAAATGCAGTAATGAGAGGCAGAGTAGACCGGCAAATACAGACTGGAAAATTTGATGCTTCTTTTGCTTCATTGCAATCGCTGCAAAACACGAGAGATGTCCAAAAGCCTGTTTGTGATGATTGTGTGAATGAAGACGAAGCAGATGGAACTGATATGGGCAATTATAATAGGTCATTGTCACCTGAAACACTTGCATTGATGTGCGATGAGCAGGATGAAATGTTTCTCGGTAATAGTTTGGAAAATAGAGTGGCCAGCAACATCAATTGTCAGAACATGATTCAAAAGTTATCTAATTCTGATGGATGCACTGATGTTTATGGAGAGCAAGAAAGGCTTGTTCTGACCAAATTCCGGGATGTCCTTCACGAACTCATTACTCTTGGGAACCTAAAAGAAACAATGTTCACTTCATTAGCCAAGAAAGATGTGGGAAGCAAGAAAGAACCTGCAGAATATGTTAATAGTGGTGCTGAAACTGGTATAAGGATGGAAAAGGATATTCAGAGCAACTGCATTGCAAATTGCATCATCCCAGCGTCTATTGAAACATCTCAGACGAATTATGCGGTAACTAATGATCATGTTAATACTGATCTTTCATTAAAGGTTGCCTGCACATTGAAATAA 1776 0.4319 MEQSEAAFDSAPGRSVRQLDFTAARGGTAHLKLPQWPSQSIIQPPCQSPPMQVKPPWLYQQIASQSQVMSQSQAAQPRQLVSPVRLTPHPVQKLPVKMLQVSKQESPESRPRPNVGLKESTPKKQKQCNCKNSRCLKLYCECFASGIYCDGCNCVNCHNDVDNESARQEAVGVILERNPNAFKPKIDSSPQGSRESKEDVSEIQVVGKHNKGCHCKKSGCLKKYCECFQNNILCSENCKCMDCKNLELSDQQRAVFNEEHNLVHTKQAANAALSGAFGSSGYGTHTTAKKRKAQKILSGNSATDQTVDQTAQYRQIFNQEIDPIASSPSPLSSSFVSDTANTRISGSLRSTYRSLLADVLQPENVKNLCSLLVMLSGVAVTTNAVMRGRVDRQIQTGKFDASFASLQSLQNTRDVQKPVCDDCVNEDEADGTDMGNYNRSLSPETLALMCDEQDEMFLGNSLENRVASNINCQNMIQKLSNSDGCTDVYGEQERLVLTKFRDVLHELITLGNLKETMFTSLAKKDVGSKKEPAEYVNSGAETGIRMEKDIQSNCIANCIIPASIETSQTNYAVTNDHVNTDLSLKVACTLK* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0948 591 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 125 160 IPR005172 -
Lan15g0948 591 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 211 245 IPR005172 -
Lan15g0948 591 SMART CXC_2 208 249 IPR033467 -
Lan15g0948 591 SMART CXC_2 123 163 IPR033467 -
Lan15g0948 591 MobiDBLite consensus disorder prediction 100 120 - -
Lan15g0948 591 ProSiteProfiles CRC domain profile. 124 248 IPR005172 -
Lan15g0948 591 PANTHER TESMIN/TSO1-RELATED 1 574 IPR028307 -
Lan15g0948 591 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 1 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0948 Lan-Chr15 18808907 18813569 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0948 14 550 CPP Transcription Factor Family AT4G29000 43.517 6.23e-134 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Lan15g0948 TCR 3.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0948 - K21776 gmx:100811459 718.383