Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0944 ATGATGGCAGTGAGTTCAGCTTGCAAGGAAGGGAGCAAGGTGATAATGGATAATGGGAAATATGTGAGGTATACACCAGAACAAGTTGAAGCACTTGAAAGGCTTTACCATGAATGTCCTAAACCAACTTCCCTTCGTCGCCAACAGCTTATTAGAGAGTGTCCCATTCTTTCGCATATTGAACCTAAGCAGATCAAGGTTTGGTTTCAGAACCGAAGATGCAGAGAGAAACAAAGGAAGGAAGCGTCACGGTTGCAAGCTGTGAACAGGAAACTGACAGCAATGAATAAGCTACTGATGGAGGAAAACGACAGATTGCAGAAACAAGTGTCTCACCTTGTGTATGAGAATAGCTTTTTTCGCCAACACACCACACAGAATGCAACTCTTGCCACGGCAGACACAAGCAGCGAGTCGGTGGTAACGAGCGGTCAGAGGAACTTGACACCTCGGCATCCACCAAGGGATGCAAGCCCTGCTGGACTTTTGTCCATTGCAGAGGAAACTTTAGCAGACTTTCTTTCGAAGGCAACTGGAACTGCTGTTGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGGTTGCCCTGGAGTGGCAGCACGTGCTTGCGGTCTTGTGGGTTTAGAACCTGCCAGGGTTGCTGAAATCCTCAAAGATCGGCTCTCATGGTTTCGTGATTGCCGGACTGTGGATGTTCTAAATATGATGCCCACTGCAAACGGAGGAACCATCGAACTGCTTTACATGCAGTTGTATGCGCCAACAACTTTGGCTCCTGGTCGCGACTTCTGGTTGCTGCGCTACACTTCTCTTTTGGAGGATGGTAGTCTTGTGGTCTGTGAACGATCACTTAACAACACTCAGAATGGTCCTACTATGCCACCAGTGCAACATTTTGTTCGAGCAGACATGATGCCAAGTGGGTATCTGATTAGGCCTTGTGAAGGAGGGGGGTCCATCATTCATATTGTTGATCACATGGTTTTAGAGCCGTGGAGTGTACCTGAAGTTTTGCGCCCACTTTACGAGTCATCCATGCTGCTTGCTCAAAGGACAACTATGGCGGCATTACGCCATTTGAGGCAGATTTCTCAAGAAGTTTCTCAGCCAAGTGTCACAGGATGGGGTAGAAGGCCTGTAGCTCTACGCGCACTTAGTCAGCGATTGAGCAAGGGCTTTAATGAAGCTGTCAATGGGTTTGCAGATGACGGCTGGTCCATGTTAGAGAGCGACGGCATAGATGATGTCACTCTACTTGTGAATTCATCACCTAGCAAGATGATGGGAGTAAATCTTGGCTATAACAACGGATTTCCTTCAGTGACCAGTTCCATACTGTGTGCAAAAGCGTCCATGTTGTTACAGAATGTACCTCCAGCACTTCTTGTTAGATTCTTACGGGAGCATCGATCAGAATGGGCAGATAGCAGTATTGATGCATACTCAGCTGCTGCTATTAAAGCTGGACCTTGTAGCTTGCCAGTGCCCCAAGAAGGAGTCTTTGGGGCTCAGGTTATTCTTCCATTAGCTCACACAATTGAGCATGAAGAGTTCATGGAGGTTATTAAGCTCGAAAACATGGGCTACTATAGGGACGACATGACTATGCCTGGTGATGTTTTCCTCCTGCAACTTTGTAGTGGAGTTGATGAACATGGAGTTGGCACCAGCGCAGAACTCGTTTTTGCTCCAATTGATGCATCTTTCTCTGATGATGCCCCAATTTTATCTTCTGGTTTTCGCATCATACCTCTTGATTCTGGCACGGATGCTGTTAGTCCAAACCGTACACTCGACCTCGCTTCAGCTCTTGATGTTGGAACGACAGGGAACAAAGCCGGTGGTGACAATTCAGGTTATTTGGGGAGCACCAAATCTGTGATGACAATAGCATTCCAGTTTGCATGTGAAGTCCACCTTCAAGATAGTATCGCAACTATGGCCCGACAATATGTCCGGAGTATTATTGCATCTGTTCAGAGGGTTTCATTAGCTCTTTCTACCTCGCAATTTGGTTCTCAAAATGCTTTTCACTTGCCAAATGGCACTCCCGAGGCTCAAACACTTACTCGGTGGATCTGTAACAGCTATAGGTTCTATCTAGGGGTAGAACTACTGAAGTGTGATGGCAATGAGCCCATTCTCAAATCTCTTTGGCATCACTCAGATGCAGTTTTGTGCTGCTCTTTAAAGGCACTACCTGTTTTCACATTTGCAAATCAAGCTGGACTTGACATGCTAGAAACAACTTTAGTTGCACTTCAAGACATCACCATAGAAAAAATATTTGATGACAGTGGAAAGAAAACACTGTGCTCTGAGTTCCCTCAGATAATGCAGCAGGGTTTTATGTGTATTGAAGGTGGTATCTGTTTATCCAGCATGGGAAGGCCAGTGTCATATGAGAGAGCAGTAGCATGGAAAGTATTAAATGAAGAAGAAACAGCTCATTGCATATGTTTCATGTTTATCAATTGGTCTTTTGTTTGA 2523 0.4574 MMAVSSACKEGSKVIMDNGKYVRYTPEQVEALERLYHECPKPTSLRRQQLIRECPILSHIEPKQIKVWFQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENSFFRQHTTQNATLATADTSSESVVTSGQRNLTPRHPPRDASPAGLLSIAEETLADFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCPGVAARACGLVGLEPARVAEILKDRLSWFRDCRTVDVLNMMPTANGGTIELLYMQLYAPTTLAPGRDFWLLRYTSLLEDGSLVVCERSLNNTQNGPTMPPVQHFVRADMMPSGYLIRPCEGGGSIIHIVDHMVLEPWSVPEVLRPLYESSMLLAQRTTMAALRHLRQISQEVSQPSVTGWGRRPVALRALSQRLSKGFNEAVNGFADDGWSMLESDGIDDVTLLVNSSPSKMMGVNLGYNNGFPSVTSSILCAKASMLLQNVPPALLVRFLREHRSEWADSSIDAYSAAAIKAGPCSLPVPQEGVFGAQVILPLAHTIEHEEFMEVIKLENMGYYRDDMTMPGDVFLLQLCSGVDEHGVGTSAELVFAPIDASFSDDAPILSSGFRIIPLDSGTDAVSPNRTLDLASALDVGTTGNKAGGDNSGYLGSTKSVMTIAFQFACEVHLQDSIATMARQYVRSIIASVQRVSLALSTSQFGSQNAFHLPNGTPEAQTLTRWICNSYRFYLGVELLKCDGNEPILKSLWHHSDAVLCCSLKALPVFTFANQAGLDMLETTLVALQDITIEKIFDDSGKKTLCSEFPQIMQQGFMCIEGGICLSSMGRPVSYERAVAWKVLNEEETAHCICFMFINWSFV* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0944 840 MobiDBLite consensus disorder prediction 131 149 - -
Lan15g0944 840 Coils Coil 75 109 - -
Lan15g0944 840 ProSiteProfiles START domain profile. 155 383 IPR002913 GO:0008289
Lan15g0944 840 Pfam Homeodomain 20 78 IPR001356 GO:0003677
Lan15g0944 840 Pfam MEKHLA domain 699 839 IPR013978 -
Lan15g0944 840 Pfam START domain 165 373 IPR002913 GO:0008289
Lan15g0944 840 SMART START_1 164 374 IPR002913 GO:0008289
Lan15g0944 840 SMART HOX_1 17 83 IPR001356 GO:0003677
Lan15g0944 840 Gene3D - 13 86 - -
Lan15g0944 840 CDD homeodomain 20 80 IPR001356 GO:0003677
Lan15g0944 840 SUPERFAMILY Homeodomain-like 19 83 IPR009057 -
Lan15g0944 840 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 5 840 IPR044830 GO:0003700
Lan15g0944 840 PANTHER CLASS III HD-ZIP PROTEIN CNA1 5 840 - -
Lan15g0944 840 CDD START_ArGLABRA2_like 159 374 - -
Lan15g0944 840 SUPERFAMILY Bet v1-like 164 375 - -
Lan15g0944 840 MobiDBLite consensus disorder prediction 131 158 - -
Lan15g0944 840 ProSiteProfiles 'Homeobox' domain profile. 15 79 IPR001356 GO:0003677
Lan15g0944 840 CDD bZIP 72 111 - -
Lan15g0944 840 Gene3D - 199 380 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0944 Lan-Chr15 18748731 18755528 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0944 16 840 Homeobox Transcription Factor Family AT4G32880 78.261 0.0 1367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lan15g0944 START 1.9e-49 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0944 K09338 - gmx:100815727 1565.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0944 15 18748731 18755528 Lan14g0736 14 14344954 14351356 LSH