Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0921 ATGATGGTGAATCCAAATACCGAAACTGCCCCTCACCCTAAACGACACCGTAAGCCCAAGCCTGAACCCTCTTCTTCATCATCGGCTCCACCAGCCCGGGTCCCACTAAGGCAGTTACTTAAAGTTGCATCAGTAGCAGGTGGCATTCAGTTTGGGTGGGCCCTACAGCTTTCTCTTTTAACTCCCTACGTTCAACAGCTTGGGATCCCTCACGCTTGGGCCAGCATTATTTGGTTATGCGGCCCGCTCTCTGGGCTTTTTGTTCAGCCTTTGGTGGGCTTATTAAGCGACCGTTGCACTAGCCGGTTTGGTCGCCGGAGGCCGTTTATTTTTGCCGGAGCTTTGTCTATCATCGTCTCCGTTCTCATAATTGGTCATGCTGCTGATATTGGGTGGTGGTTTGGGGATACGGTGAATCATCGGCCGTGGGCTGTGGCGGCTTTCGTGTTCGGTTTTTGGATTCTGGATGTTGCTAACAATGTCACTCAAGGTCCTTGTAGAGCTTTGCTCGGTGATCTCACAGGCAAGGATCATCGAAGGACACGTGTTGCAAATGCTTATTTCTCCCTGTTTATGGCCATTGGTAACATTCTTGGCTATGCAACTGGTGCATACAGTGGTTGGTACAAGGTCTTTCCTTTCACACTTACCCCTGCATGCAATATTAGTTGTGCAAATCTCAAGTCTGCTTTCTTTCTCGACATTATTTTCATTGTGGTCACCACCTATATCAGCATCATGTCAGCTCATGAGGTGCCTCTAAGTTCAAGTGGGGCTACCCATGCTGGAGAAGCAGCCGGGGAGTCAGGTAGCACAGAAGAAGCCTTCATGTGGGAGTTATTCGGGACATTCAGATATTTTTCAGCCTCTGTATGGACAATACTATCTGTTACTGCTCTAACATGGGTTGGGTGGTTTCCGTTTCTTCTCTTTGACACTGACTGGATGGGCCGAGAGATTTATGGTGGTGAGCCAAATGAAGGCCTTAATTATGATAGTGGAGTTAGAATGGGGGCGGTTGGTTTATTGCTTAATTCAGTTGTTCTTGGAATAACATCATTGTTCATGGAGAGGCTATGCAGGAATCGGGGGCCTGGGTTTGTGTGGGGAATCTCAAATATCATAATGGCCATCTGCTTTGTTGCAATGCTTGTGTTAACCTATGTAGCAAGTAACATTGGCTATTTAGGCATTGATTTTCCGCCAACTTTCATTGTGATGGCAGCATTGGTAATCTTTACCATCCTTGGGTTTCCACTAGCAATCACTTACAGTGTTCCATATGCCTTAATTTCCACACATATTCAGTCATTGGGACTGGGCCAAGGATTATCAATGGGAGTTCTAAATCTTGCAATAGTAATCCCACAGATGGTCGTGTCAGTGGGAAGTGGACCATGGGATCAGCTATTTGGTGGAGGAAACTCTCCAGCCTTTGCTGTTGGAGCTGTCGCAGGCCTTGTTGGTGGACTCATAGCTGTCTTGGCTATTCCTCGACCCGGTGGTCAAAAGGCTAGAAGCCAAGTTTGA 1530 0.4732 MMVNPNTETAPHPKRHRKPKPEPSSSSSAPPARVPLRQLLKVASVAGGIQFGWALQLSLLTPYVQQLGIPHAWASIIWLCGPLSGLFVQPLVGLLSDRCTSRFGRRRPFIFAGALSIIVSVLIIGHAADIGWWFGDTVNHRPWAVAAFVFGFWILDVANNVTQGPCRALLGDLTGKDHRRTRVANAYFSLFMAIGNILGYATGAYSGWYKVFPFTLTPACNISCANLKSAFFLDIIFIVVTTYISIMSAHEVPLSSSGATHAGEAAGESGSTEEAFMWELFGTFRYFSASVWTILSVTALTWVGWFPFLLFDTDWMGREIYGGEPNEGLNYDSGVRMGAVGLLLNSVVLGITSLFMERLCRNRGPGFVWGISNIIMAICFVAMLVLTYVASNIGYLGIDFPPTFIVMAALVIFTILGFPLAITYSVPYALISTHIQSLGLGQGLSMGVLNLAIVIPQMVVSVGSGPWDQLFGGGNSPAFAVGAVAGLVGGLIAVLAIPRPGGQKARSQV* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0921 509 SUPERFAMILY MFS general substrate transporter 39 504 IPR036259 -
Lan15g0921 509 Pfam MFS/sugar transport protein 54 201 - -
Lan15g0921 509 CDD MFS_SLC45_SUC 39 495 - -
Lan15g0921 509 PANTHER SUCROSE/H+ SYMPORTER, PLANT, MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED 23 507 - -
Lan15g0921 509 MobiDBLite consensus disorder prediction 1 32 - -
Lan15g0921 509 PANTHER SUGAR TRANSPORTER 23 507 - -
Lan15g0921 509 TIGRFAM GPH_sucrose: sucrose/H+ symporter 34 500 IPR005989 GO:0005887|GO:0008515|GO:0015770
Lan15g0921 509 Gene3D MFS general substrate transporter like domains 36 497 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0921 Lan-Chr15 18517252 18525114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0921 2 504 Sucrose Transporter Gene Family AT1G09960 68.959 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0921 K15378 - gmx:100787939 818.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0921 15 18517252 18525114 Lan3g1532 3 26776365 26780429 LSH