Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0914 ATGTCTCTGCCGAGGCTCGGCGTAGGGGAGGAGGGGGAGAGTAATGTGATTTTGTTGGTTTCATCAACAGCCAAAGAAAATGTGTGTCTCAAGAGCTTAGAACTAAAAGAACACAACTACATGGGGTTATCTGATTGTTCTTCTGTGGATAGCTCAGTTCCTTCATTCTCAGATGAGAGTAAAAGTAATCTGAACCTGAAAGCCACAGAACTCAGGCTTGGCCTTCCAGGATCTCAGTCACCTGAAAGAGATTCTGATCTTTGCTTAAGAAGCTCAACTCAATTCGATGAAAAGCCTCTTTTTCCTTTGCACCCTTCGTCCGAGGATCATCATTCCTCAGCAAAAATTGCTGTTTTAGGCAACAAAAGAGGTTTCTCAGATGCCATGAATGGTTTCTCAGAGGGGAAATTTGTTGTTAATTCTGAGACTGCTACGATACTTTCACCGAGGCCTTCTTCTAACTTGGGATTAAAACCTGGTCCTTTGCTTGAGAGTGTTACGGCTCAACAAGCCAAAATGAAAGAATTAGCAACAGGGAAGGTTGGACTCGAGAGGCCTCTTGCTCTTAATGAAACCAAACCAGGCCTTAATGGTTCTGCAAATAATAACAGCAGTGCACCGGCTACCAAGGCTCAGGTTGTAGGGTGGCCTCCTATAAGATCATTTAGGAAAAATTCATTGACAACTAATTCCAAGAACACTGAAGAAGTAGATGGTAAACCGGGGTCTATTGCACTGTTCATCAAAGTCAGCATGGATGGTGCTCCCTATTTAAGGAAAGTAGACTTGAAGAATTACTCTGCATATCCAGAATTATCTTCTGCTCTAGAGAAAATGTTCAGCTGTTTTACTATAAGTCAATGTGGATCTCATGGAACTCTGGGCAGGGATTTGATGAATGAAACCAAACTGAGGGATCTTCTTCATGGGTCAGAATATGTTCTTACTTATGAGGACAAAGATGGAGACTGGATGCTTGTTGGTGATGTTCCCTGGGAGATGTTTATTGAAACATGCAGGAGGATGAGGATCATGAAGAGTTCTGATGCCATTGGTCTAGCTCCACGAGCTGTCGAAAAAATCAAGTGCAAGAACTAG 1098 0.4271 MSLPRLGVGEEGESNVILLVSSTAKENVCLKSLELKEHNYMGLSDCSSVDSSVPSFSDESKSNLNLKATELRLGLPGSQSPERDSDLCLRSSTQFDEKPLFPLHPSSEDHHSSAKIAVLGNKRGFSDAMNGFSEGKFVVNSETATILSPRPSSNLGLKPGPLLESVTAQQAKMKELATGKVGLERPLALNETKPGLNGSANNNSSAPATKAQVVGWPPIRSFRKNSLTTNSKNTEEVDGKPGSIALFIKVSMDGAPYLRKVDLKNYSAYPELSSALEKMFSCFTISQCGSHGTLGRDLMNETKLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIETCRRMRIMKSSDAIGLAPRAVEKIKCKN* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0914 365 ProSiteProfiles PB1 domain profile. 245 347 IPR000270 GO:0005515
Lan15g0914 365 Pfam AUX/IAA family 69 356 IPR033389 -
Lan15g0914 365 Gene3D - 242 359 - -
Lan15g0914 365 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 21 359 IPR003311 GO:0005634|GO:0006355
Lan15g0914 365 PANTHER AUXIN-INDUCED PROTEIN 21 359 - -
Lan15g0914 365 SUPERFAMILY CAD & PB1 domains 243 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0914 Lan-Chr15 18439216 18443720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0914 249 355 B3 DNA Binding Superfamily AT4G23980 29.907 6.37e-08 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lan15g0914 AUX_IAA 5.8e-90 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0914 K14484 - gmx:100815447 553.903