Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0912 ATGGAGCTCTATGACCATGATTTCTTGGAGGAGTTAATGGCTCTAAGAAGAGAAACATGGGACACTATTCCAAACACAGAAGAAAATCAGTTATTCTCTAATAGTTATAGTTTTGATCAAAACTCTTTACCTTTTCTCCCAAACAACACTTCTTGTGGTCAAGAATTTCCTCAAAGTTACAACAATGACTACAACACCTTCAGTGAAATCTATGGCTCATTACTTGATGAACCATCATATTATAACACATTTCATATTCCACATAACACCCCTCCATTTCTTGCTCAAGAAGATTTCCCATTGTCCCTGATGGAAGAAGTGGATAATACATGTTTGCTTGGTGAAGAGCTTCAGAATTTGGAACTGCAAACCACATGCAAAATGGATCCAACACAATCACCAGAAAAGCCAGTTTTAAACATGGAAACAAGTCTAGATAGAAATAATCGAGCAAAGAAGCTCCAAGGGCAACCCTCCAAGAATCTTATGGCTGAAAGGAGAAGAAGAAAGAGGTTAAATGACCGCCTCTCTATGCTAAGGTCAATTGTCCCTAAGATAAGTAAGATGGACAGAACATCTATTGTTGGAGACACTATTGATTACATGAAAGAGCTTCTGGACAAGATCAACAACTTGCAACAAGAAATAGATGTAGATGCAAATATGGCTGGCATTTTCAAAGATGTAAAGCCAAATGAAATCTTCATTAGAAATTCTCCTAAGTTTAAGGTGGAGAGGAATTTGGACACCAAGGTTGAAATTTGCTGTGCTGGGAAGCCAAGCTTGTTGCTTTCTACAGTAAAGACCCTTGAAGCATTAGGCTTAGAGATTCAACAATGTGCTATTAGCTGTTTCAATGATTTCTCAATGCAGGCTTCTTGCACTGAGAAATTGGAGCAAAGGACAATGTTGAGTTCTGAAGATATAAAACAAGTATTATTTAGAAGTGCAGGATATGGAGGAAAGTGTTTGTGA 975 0.3764 MELYDHDFLEELMALRRETWDTIPNTEENQLFSNSYSFDQNSLPFLPNNTSCGQEFPQSYNNDYNTFSEIYGSLLDEPSYYNTFHIPHNTPPFLAQEDFPLSLMEEVDNTCLLGEELQNLELQTTCKMDPTQSPEKPVLNMETSLDRNNRAKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTSIVGDTIDYMKELLDKINNLQQEIDVDANMAGIFKDVKPNEIFIRNSPKFKVERNLDTKVEICCAGKPSLLLSTVKTLEALGLEIQQCAISCFNDFSMQASCTEKLEQRTMLSSEDIKQVLFRSAGYGGKCL* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0912 324 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 156 205 IPR011598 GO:0046983
Lan15g0912 324 PANTHER DNA BINDING PROTEIN 3 324 - -
Lan15g0912 324 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 160 218 IPR036638 GO:0046983
Lan15g0912 324 Coils Coil 202 222 - -
Lan15g0912 324 CDD ACT_UUR-ACR-like 250 291 - -
Lan15g0912 324 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 3 324 - -
Lan15g0912 324 Pfam Helix-loop-helix DNA-binding domain 162 205 IPR011598 GO:0046983
Lan15g0912 324 SMART finulus 162 211 IPR011598 GO:0046983
Lan15g0912 324 Gene3D - 146 220 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0912 Lan-Chr15 18423396 18425149 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0912 142 324 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 64.171 4.02e-70 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan15g0912 HLH 3.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0912 - - gmx:100784380 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0912 15 18423396 18425149 Lan14g0712 14 14108335 14110277 LSH
Lan15g0912 15 18423396 18425149 Lan3g1533 3 26797408 26799090 LSH