Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0910 ATGGTGGTTAGGAAAGTGGGGAAGTATGAGATAGGAAGAACGATTGGTGAAGGAACCTTCGCGAAGGTAAAGTTCGCTCAGAACACAGAAACTGGTGAAAGTGTAGCTATGAAAGTGCTTGATCGAAGCACTATCCTTAAGCATAAGATGGTTGATCAGATCAAAAGGGAGATTTCGATTATGAAGCTTGTTAGGCATCCTTATGTTGTTCGTCTGCATGAGGTTCTAGCAAGCCGTACTAAGATTTATATCATATTGGAGTTCATTACAGGTGGTGAATTGTTTGATAAAATTATACACCATGGGCGTCTTAGTGAAGCTGAATCTAGAAGATACTTCCAACAGCTTATTGATGGTGTAGATTATTGCCACAGTAAGGGAGTGTATCACAGAGATTTAAAGCCTGAAAATCTTTTGCTTGATTCACTAGGAAACATAAAAATTTCAGATTTTGGTTTAAGTGCATTGCCAGAACAGGGTGTGAGTATCCTCAGGACAACTTGTGGGACTCCAAATTATGTAGCTCCTGAGGTACTCAGTCACAAGGGATATAATGGTGCTGTTGCAGATGTCTGGTCCTGTGGGGTTATCCTCTATGTCCTGATGGCTGGATATCTTCCCTTTGATGAGCTTGAACTAACTGCGTTATACAGTAAGATTAATACAGCTGAGTACGCATGCCCTGCTTGGTTTCCCGTGGGAGCAAAATCATTAATAAATAGAATATTAGACCCAAATCCTGAAACTCGTATAACCATTGAGCAGATAAGAAATGACGAATGGTTTCAGGGGGGCTATGTTCCAGTCAGTCTTCTTGAGTATGAAGAAGTGAATCTTGATGATGTAAATGCTGCTTTTGACTATGACGAGGAACCGAAGGCTAATCAACTACAGGAGAATGAGGACACAGGTCCCTTACTGCTTAATGCATTTGAAATGATAATTCTGTCTCAAGGCTTAAATCTTGCAACTATCTTTGATCGTGGACAGGACTCTGTAAAGCAGCACCAAACACGCTTTATCTCTCAAAAGCCAGCAAAAGTGGTTTTATCAAGTATGGAAGTTGTGGCTCAATCGATGGGATTTAAGACGCATATTCGCAACTATAAGATGAGGGTAGAGGGTGTTTCAGCAAATAAAACATCTTTTTTCTCTGTTATCCTCGAAGTTTTTGAAGTGGCTCCTACATTTTATATGGTTGATATTCAGAAAGCAGCTGGAGATGCAAATGAATACCTCAAGTTTTACAAGAACTTCTGTAGCAATCTTGAGGATATAATCTGGAAACCATCCAATGAAGCAAGCAAATCAAGAATCTCCAAGACTAAAAACAAAAGGCGATAG 1344 0.3988 MVVRKVGKYEIGRTIGEGTFAKVKFAQNTETGESVAMKVLDRSTILKHKMVDQIKREISIMKLVRHPYVVRLHEVLASRTKIYIILEFITGGELFDKIIHHGRLSEAESRRYFQQLIDGVDYCHSKGVYHRDLKPENLLLDSLGNIKISDFGLSALPEQGVSILRTTCGTPNYVAPEVLSHKGYNGAVADVWSCGVILYVLMAGYLPFDELELTALYSKINTAEYACPAWFPVGAKSLINRILDPNPETRITIEQIRNDEWFQGGYVPVSLLEYEEVNLDDVNAAFDYDEEPKANQLQENEDTGPLLLNAFEMIILSQGLNLATIFDRGQDSVKQHQTRFISQKPAKVVLSSMEVVAQSMGFKTHIRNYKMRVEGVSANKTSFFSVILEVFEVAPTFYMVDIQKAAGDANEYLKFYKNFCSNLEDIIWKPSNEASKSRISKTKNKRR* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0910 447 Pfam Protein kinase domain 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g0910 447 Gene3D Kinase associated domain 1, KA1 307 429 - -
Lan15g0910 447 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 444 - -
Lan15g0910 447 SUPERFAMILY Protein kinase-like (PK-like) 6 277 IPR011009 -
Lan15g0910 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Lan15g0910 447 Pfam NAF domain 306 364 IPR004041 GO:0007165
Lan15g0910 447 ProSiteProfiles NAF domain profile. 303 327 IPR018451 GO:0007165
Lan15g0910 447 SMART serkin_6 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan15g0910 447 PANTHER - 2 444 - -
Lan15g0910 447 ProSitePatterns Protein kinases ATP-binding region signature. 15 47 IPR017441 GO:0005524
Lan15g0910 447 Gene3D Transferase(Phosphotransferase) domain 1 3 306 - -
Lan15g0910 447 CDD CIPK_C 309 425 - -
Lan15g0910 447 ProSiteProfiles Protein kinase domain profile. 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0910 Lan-Chr15 18394119 18400193 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0910 1 389 CBL-interacting serine-threonine protein kinases AT4G24400 82.776 0.0 672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lan15g0910 Pkinase 6.7e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0910 - - gmx:100813117 817.379