Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0896 ATGGCCTACCCGGGTTCAATGCAATTGTCTCCTGACTTCAGGCTCCACAGTACTAGTGGATTCTGTAATTCCCATCGCAATCTGGTGGGGGTTGGTCACTTACATTTGGTTACAGTAAATCTGTCACCACTTAGCTTGAAGCAGGATTTTTCAGCACCCCATCTTTTAAGTAGAGTACCACCAATAAGGCGTGTGCCTTCCAGATGTAACATGTTTGTATGTCGATCTGTCCTGATACCAGGTGGAGGGAGTGTGACTCCGCTCCTGAAATCTTCTGCTGTTATTTTAACAAGGTCATATGATGCTTTACGAGGAAGCCCTGTTTTGCTTCAGTTAATTCCGGCGCTCGGTCTCATCGCCTTTACTGTTTATGGTCTTGAGCCACTCCTACGCCTCAGCAGAGTTCTATTTCTTCAAAAGACGGATAGTAGTTGGAAGAAAAGTAGTTCGCGATATGTTATGACATCATATTTTCAGCCTTTGCTGTTGTGGTCTGGAGCAATGCTCATATGCAGGGCATTAGATCCACTAGTCCTGCCATCAGAGGCCAGCCAGGTTGTAAAGCAGCGGCTGCTGAATTTTGTTAGATCTTTGTCAACAGTGATTTCATTTGCTTACTGTTTATCAAGCGTAATTCAACAAGCACAAAAATTCTTTATGGAGGCAAATGACTCAAGTGATGCAAGAACTATGGGCTTTGATTTTGCTGGGAAAGCTGTATATTCAGCTGTATGGGTTGCTGCTGTGTCATTGTTCATGGAGTTGCTAGGTTTCTCCACACAGAAGTGGTTAACTGCTGGTGGTTTGGGCACTGTATTGCTCACACTTGCAGGTCGTGAGATATTTACGAACTTTCTTTCAAGTATAATGATACATGCAACTCGGCCATTTATTTTAAATGAGTGGATTCAAACAAAGATTGAAGGATATGAAGTTTCTGGCACAGTTGAGCATGTAGGATGGTGGTCACCAACTATTGTGAGAGGTGATGATCGTGAGGCAGTTCATATTCCTAATCACAAGTTCACTGTAAACGTTGTAAGAAATCTGAGTCAGAAATCTCATTGGCGCATCAAGAATTACATTGCTATCAGTCACTTGGATGTGAACAAAATTAATAATATTGTAGCTGATATGCGCAAGGTTTTGTCTAAGAATCCTCAAGTAGAGCAGCAAAGATTGCACAGGAGGGTTTTTCTGGAGAATGTCAATCCCGAAAATCAAGCTCTTATGATATTGATATCTTGTTTTGTGAAAACTTCACATTTTGAAGAGTACCTTTGCGTTAAGGAGGCAATCCTCTTGGATCTTCTCAGAGTTGTTAGTCATCATCGAGCTCGTCTGGCCACTCCGATCCGCACAGTTCAGAAAATATATGGTGAGGCTGATTCGGAAAATATACCCTTTGGGGACACCATTTTCAGTCGATCCAGAGCAGCAGCAAATCGCTTCCTACTGATAGAACCACCATATAAAGTTAATGGTGATGATAAAGTCAAGCCTTTGACTCGTTCAACTCGTACAAATGAGGAAAAAGATGGCAAGATTGATGAAACCTCAGCATCTGATTCCAAAGGAGATGACAAGTCTTCAGTGACGTCAGCCTCCTCACCTGGTGTAAACTCCAAGGATAAATCCAAGTCAGTTTCTGAAGCCCAAATTCAGCAGAATATGGGCTCTGATAGTTCAGTTGAGAAGAGCCCCAAAATCTTGCAGCCTAAAAAAGATAGTGCAGGAGATGCAGGGAAGGGAACTTCAGTTCCATCAACTAAAAACAGTGCACAAAATCCTGTGCCTGAAGTTTATCCTGTGGCTTCCCGTGAGTCTAGCCGAAGAGAGACTGCTTTTGCTACTTCACTGCCAAAGCAAGATGAAGAGAGATCTTCTGTGTCTTCATCACCCGAGAAGACTTCCAAAACCTTGCACCCTAAAAAGGAAAGTGGTCCTGTACAAGGTGCTGTGCCTGGAGTTTCTCAAGCTACTACTTCCCATGAGTCTAGCAGGGTAGACACAGCGTCTGCTATTTCTTCACAGTCAAAGCAAGATGAAGAGAAATCAGCTGTGTCTTCATCATCAATTAGACCTTCCATGGAAGAAAATATTCTTCTTGGTGTTGCCCTAGAAGGCTCAAAACGAACGCTTCCGATTGAGGAAGACACTCCATCTCCTATCCCTGCAGAGTCGCAAGAATTTGCTGTCCAACGGAATGGAAGTGGACCCCCTGCTAGCAAGGATAAGAAAGATGGTCAGATGTCTTCATTTCCAACAGCTAAGCAAAATGACTAG 2286 0.4318 MAYPGSMQLSPDFRLHSTSGFCNSHRNLVGVGHLHLVTVNLSPLSLKQDFSAPHLLSRVPPIRRVPSRCNMFVCRSVLIPGGGSVTPLLKSSAVILTRSYDALRGSPVLLQLIPALGLIAFTVYGLEPLLRLSRVLFLQKTDSSWKKSSSRYVMTSYFQPLLLWSGAMLICRALDPLVLPSEASQVVKQRLLNFVRSLSTVISFAYCLSSVIQQAQKFFMEANDSSDARTMGFDFAGKAVYSAVWVAAVSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSIMIHATRPFILNEWIQTKIEGYEVSGTVEHVGWWSPTIVRGDDREAVHIPNHKFTVNVVRNLSQKSHWRIKNYIAISHLDVNKINNIVADMRKVLSKNPQVEQQRLHRRVFLENVNPENQALMILISCFVKTSHFEEYLCVKEAILLDLLRVVSHHRARLATPIRTVQKIYGEADSENIPFGDTIFSRSRAAANRFLLIEPPYKVNGDDKVKPLTRSTRTNEEKDGKIDETSASDSKGDDKSSVTSASSPGVNSKDKSKSVSEAQIQQNMGSDSSVEKSPKILQPKKDSAGDAGKGTSVPSTKNSAQNPVPEVYPVASRESSRRETAFATSLPKQDEERSSVSSSPEKTSKTLHPKKESGPVQGAVPGVSQATTSHESSRVDTASAISSQSKQDEEKSAVSSSSIRPSMEENILLGVALEGSKRTLPIEEDTPSPIPAESQEFAVQRNGSGPPASKDKKDGQMSSFPTAKQND* 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0896 761 MobiDBLite consensus disorder prediction 611 627 - -
Lan15g0896 761 MobiDBLite consensus disorder prediction 583 599 - -
Lan15g0896 761 Gene3D - 162 295 - -
Lan15g0896 761 MobiDBLite consensus disorder prediction 526 567 - -
Lan15g0896 761 MobiDBLite consensus disorder prediction 495 761 - -
Lan15g0896 761 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 2, CHLOROPLASTIC 1 753 - -
Lan15g0896 761 MobiDBLite consensus disorder prediction 495 525 - -
Lan15g0896 761 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 753 IPR045042 -
Lan15g0896 761 MobiDBLite consensus disorder prediction 654 697 - -
Lan15g0896 761 MobiDBLite consensus disorder prediction 628 643 - -
Lan15g0896 761 SUPERFAMILY Sm-like ribonucleoproteins 281 351 IPR010920 -
Lan15g0896 761 Gene3D - 297 352 IPR023408 -
Lan15g0896 761 Pfam Mechanosensitive ion channel 238 445 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0896 Lan-Chr15 18240914 18247004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0896 6 733 Mechanosensitive Ion Channel Family AT1G58200 52.517 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0896 K22047 - gmx:100796022 1025